BS28915.complete Sequence
473 bp assembled on 2012-04-19
GenBank Submission: KX806169
> BS28915.complete
GAAGTTATCAGTCGACATGAGCGCTCAACAATTTGAGCAAGAAGTTCTTC
AAGCCCACAATTTATATCGGGCCAAGCATGGTGCTCAACCCTTGACTTTG
AGTCCCAAACTGAATCGATTGGCCACGGAATGGGCCAATTATTTGCTGTC
CAGAAATCGCATGGAACATCGACAGAACAGTGGATATGGTGAGAACATTT
ACATGGCCTCCGGGGGAAATCTGAAAGGTGCCGATGCCGTCAGATCCTGG
TACGAAGAGATTCGACAGTACAATTGGAATTCTCCGTCGTTTCAAGGTAA
CACCGGCCATTTCACTCAGGTGGTCTGGAAGAGCTCCACCGAGCTAGGCG
TGGGTTTTGCGAAGAGTGGCAGTACCATCTATGTTGTGTGCAACTACAAT
CCCCCTGGCAACTACAACAACTTGTTCAGGGAGAATGTCGCACCCCCAAT
GCAATAGAAGCTTTCTAGACCAT
BS28915.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:32:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16995-RA | 441 | CG16995-PA | 1..441 | 17..457 | 2205 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:32:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16995-RA | 721 | CG16995-RA | 80..521 | 17..458 | 2210 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:32:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 2308305..2308531 | 140..366 | 1135 | 100 | Plus |
2L | 23513712 | 2L | 2308142..2308249 | 32..139 | 540 | 100 | Plus |
2L | 23513712 | 2L | 2308579..2308672 | 365..458 | 470 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:32:07 has no hits.
BS28915.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-19 14:05:20 Download gff for
BS28915.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16995-RA | 80..520 | 17..457 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:20 Download gff for
BS28915.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16995-RA | 80..520 | 17..457 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:51:44 Download gff for
BS28915.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16995-RA | 80..520 | 17..457 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:51:44 Download gff for
BS28915.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 2308142..2308249 | 32..139 | 100 | -> | Plus |
2L | 2308305..2308531 | 140..366 | 100 | -> | Plus |
2L | 2308581..2308671 | 367..457 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:20 Download gff for
BS28915.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 2308142..2308249 | 32..139 | 100 | -> | Plus |
arm_2L | 2308305..2308531 | 140..366 | 100 | -> | Plus |
arm_2L | 2308581..2308671 | 367..457 | 100 | | Plus |
BS28915.pep Sequence
Translation from 16 to 456
> BS28915.pep
MSAQQFEQEVLQAHNLYRAKHGAQPLTLSPKLNRLATEWANYLLSRNRME
HRQNSGYGENIYMASGGNLKGADAVRSWYEEIRQYNWNSPSFQGNTGHFT
QVVWKSSTELGVGFAKSGSTIYVVCNYNPPGNYNNLFRENVAPPMQ*
BS28915.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:01:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16995-PA | 146 | CG16995-PA | 1..146 | 1..146 | 791 | 100 | Plus |
CG4270-PA | 170 | CG4270-PA | 31..168 | 6..143 | 374 | 48.6 | Plus |
CG34049-PB | 306 | CG34049-PB | 146..282 | 7..143 | 314 | 45.3 | Plus |
CG31482-PA | 195 | CG31482-PA | 23..162 | 7..146 | 289 | 41.3 | Plus |
CG4270-PB | 142 | CG4270-PB | 31..141 | 6..116 | 286 | 46.8 | Plus |