BS28917.complete Sequence
509 bp assembled on 2012-04-19
GenBank Submission: KX804663
> BS28917.complete
GAAGTTATCAGTCGACATGGGCCGTAACAACGTCATCTGCACGATCTGCT
CGGAGCGGTTTCGCACCTCGGACAATATACAAGCCGGCAGCTGCGGACAC
GCGTTCCACGAGGACTGCCTAGACCACTGGAGAAAGCAATCAAGGACTTG
CCCTATCTGCCGCAGCCAGGATGCCGCCTACTTTCAGCTTTATCTGGACT
TTGAGGAGTTTCCGGAAAGTGCATCGGCTCAGGGTGGCAGTTGGGGCGGC
CATAATCGGAGCCAAGGTCACAGCAGCAGCAGCAGCAGCTGCAGCAGCAA
CAACAACAACAGTAACGACAACAGCAGCAGTGACGATTATATTGGAATTA
TGAGGGAGTACGAGAATCTACTTTACGAGACGGGCGTGTACCGAGAAGAG
ATCGAATATCTTAACCAGCGGATCGGAGCCCTTACTGTCCTCAATGCTGA
ACTCAGCAAACTACATGAATGTTCGGATTCGGATGTTGATTAAAAGCTTT
CTAGACCAT
BS28917.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:32:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4325-RB | 477 | CG4325-PB | 1..477 | 17..493 | 2385 | 100 | Plus |
CG4325-RA | 477 | CG4325-PA | 1..477 | 17..493 | 2385 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:32:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4325-RB | 897 | CG4325-RB | 92..572 | 17..497 | 2405 | 100 | Plus |
CG4325-RA | 583 | CG4325-RA | 92..572 | 17..497 | 2405 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:32:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 2043055..2043413 | 497..139 | 1795 | 100 | Minus |
X | 23542271 | X | 2043606..2043727 | 138..17 | 610 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:32:11 has no hits.
BS28917.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-19 14:05:21 Download gff for
BS28917.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4325-RA | 92..566 | 17..491 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:22 Download gff for
BS28917.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4325-RA | 92..566 | 17..491 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:51:47 Download gff for
BS28917.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4325-RA | 92..566 | 17..491 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:51:47 Download gff for
BS28917.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 2043061..2043413 | 139..491 | 100 | <- | Minus |
X | 2043606..2043727 | 17..138 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:22 Download gff for
BS28917.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 1937094..1937446 | 139..491 | 100 | <- | Minus |
arm_X | 1937639..1937760 | 17..138 | 100 | | Minus |
BS28917.pep Sequence
Translation from 16 to 492
> BS28917.pep
MGRNNVICTICSERFRTSDNIQAGSCGHAFHEDCLDHWRKQSRTCPICRS
QDAAYFQLYLDFEEFPESASAQGGSWGGHNRSQGHSSSSSSCSSNNNNSN
DNSSSDDYIGIMREYENLLYETGVYREEIEYLNQRIGALTVLNAELSKLH
ECSDSDVD*
BS28917.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:01:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4325-PB | 158 | CG4325-PB | 1..158 | 1..158 | 856 | 100 | Plus |
CG4325-PA | 158 | CG4325-PA | 1..158 | 1..158 | 856 | 100 | Plus |
CG10916-PB | 263 | CG10916-PB | 29..94 | 5..67 | 168 | 50 | Plus |
CG10916-PA | 263 | CG10916-PA | 29..94 | 5..67 | 168 | 50 | Plus |