BS28925.complete Sequence
779 bp assembled on 2012-04-19
GenBank Submission: KX801351
> BS28925.complete
GAAGTTATCAGTCGACATGACTGATTTAAAGTTAACTGTGGCACTAACCA
GCGTTAATGCGGAGAATATGTCGCGGCACGACATGCTTCAGTGGGTGAAC
AACATGGTCCACGGCCACTTCAAGAAGATCGAAGAGCTGTGCTCAGGTGC
TGCCTACTGCCAGATGATGGAGATGATCTTTCCCAACTGCATTAACCTGA
AGCGCGTCAAGATGACCGCCAAACTAGAGCACGAGTATCTACACAATCTT
AGGCTCTTCCAGGAAGCCTTCAATCGCTTGAAGCTGGACAAAACGGTGCC
AATCGATCGACTGATCAAGGGACGCTTCCAGGACAACTTTGAGTTCCTGC
AGTGGTTCAAGAAGTTCTTCGACTCGCAGGCTCCGGGCTTGGAGAACATT
AAGTCGCTGGCCAATGCGCCGTTGGCAAAGCCCATAAAGCCGCGCCAATT
CGCCAAGGAGCGATCACCAGTCAACGCCAATGATGATGCGCTCAAAGAGC
TGATTGATGAAATGAAGAACCTAAGCCTGAAGCGGGAGGACATCATGGAG
GCCAGCAATCAGATCTACAACAAACTGCGCCTGGTCGAGGATTTGGTCAA
CGACATGATCAACAACAACCAGCTAGTTGAGTTGTGCAAACGCATTCAAG
CGGTGCTCTACAAAACGATAGATGGTGAAATCAACGAGGAACCCGTCGAG
GTTAATGAGGATAATGGTGATGAAGGCGCCGAACACGCGGATCCCAATGA
CGGATTATATTAGAAGCTTTCTAGACCAT
BS28925.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:32:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18190-RB | 747 | CG18190-PB | 1..747 | 17..763 | 3705 | 99.7 | Plus |
Eb1-RF | 894 | CG3265-PF | 285..348 | 310..373 | 200 | 87.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:32:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18190-RB | 1077 | CG18190-RB | 281..1029 | 17..765 | 3715 | 99.7 | Plus |
Eb1-RF | 1891 | CG3265-RF | 480..543 | 310..373 | 200 | 87.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:32:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18851955..18852576 | 765..144 | 3080 | 99.7 | Minus |
2R | 25286936 | 2R | 18852632..18852763 | 148..17 | 660 | 100 | Minus |
2R | 25286936 | 2R | 6753244..6753307 | 310..373 | 200 | 87.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:32:38 has no hits.
BS28925.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-19 14:05:25 Download gff for
BS28925.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18190-RB | 227..973 | 17..763 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:28 Download gff for
BS28925.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18190-RB | 281..1027 | 17..763 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:51:57 Download gff for
BS28925.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18190-RB | 281..1027 | 17..763 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:51:57 Download gff for
BS28925.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18851957..18852573 | 147..763 | 99 | <- | Minus |
2R | 18852634..18852763 | 17..146 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:28 Download gff for
BS28925.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 14739462..14740078 | 147..763 | 99 | <- | Minus |
arm_2R | 14740139..14740268 | 17..146 | 100 | | Minus |
BS28925.pep Sequence
Translation from 16 to 762
> BS28925.pep
MTDLKLTVALTSVNAENMSRHDMLQWVNNMVHGHFKKIEELCSGAAYCQM
MEMIFPNCINLKRVKMTAKLEHEYLHNLRLFQEAFNRLKLDKTVPIDRLI
KGRFQDNFEFLQWFKKFFDSQAPGLENIKSLANAPLAKPIKPRQFAKERS
PVNANDDALKELIDEMKNLSLKREDIMEASNQIYNKLRLVEDLVNDMINN
NQLVELCKRIQAVLYKTIDGEINEEPVEVNEDNGDEGAEHADPNDGLY*
BS28925.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:02:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18190-PB | 248 | CG18190-PB | 1..248 | 1..248 | 1294 | 100 | Plus |
Eb1-PE | 290 | CG3265-PE | 1..276 | 4..220 | 417 | 33.9 | Plus |
Eb1-PF | 297 | CG3265-PF | 1..123 | 4..126 | 417 | 57.7 | Plus |
Eb1-PG | 291 | CG3265-PG | 1..121 | 4..124 | 414 | 57.9 | Plus |
Eb1-PA | 291 | CG3265-PA | 1..121 | 4..124 | 414 | 57.9 | Plus |