BS28932.complete Sequence
584 bp assembled on 2012-04-19
GenBank Submission: KX801080
> BS28932.complete
GAAGTTATCAGTCGACATGGTCTCGCCCAAACGGAGACTAATCGACGATT
CCATTGCTCCCTCAGCTGCCGATCTCCAGCGGACATACGACGGACATGAT
GGGCCTCACGTTTTCGGAACACCCGGCAATCAAGTCTACATTCGGGGGCA
GAACGATGGCGTATACAAGGTGCCAGGAGTAGGTGGTCAGTTCCATCACG
CATCGTCGCCAGCAGATCACGTCTATACGGATGAGCAGGGGATCACGTAT
GTGCACAAAAAAGACGCTGGAGGACCAGGAACACATACGCTTAGAGGACC
AGGTCTAGCTGCTGTACAGCCCGCCTACTCCACTGTGCAGCCTGCGGGAC
TTCGCAATCCCCAGTTTCATGTGGAGCGAAGTGGTCGCACTGTGGATGTT
GGTTCTGGAGGATTTGTCGTCCAAAGGAGCAGACGTAGTCCTCAGTTCCA
TGTGGAGCGTCCTGGTCGCACTGTGGATGTGGGTTCCGGAGGATTTTTTG
TCCAAAGGGGCAGGCGTAGTCCCCAGTTTCCTGTGGAGCGACCTTGGCAA
AGGGCTTTGAAGGACTGAAAGCTTTCTAGACCAT
BS28932.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:32:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13749-RB | 552 | CG13749-PB | 1..552 | 17..568 | 2760 | 100 | Plus |
CG13749-RB | 552 | CG13749-PB | 342..447 | 439..544 | 305 | 85.8 | Plus |
CG13749-RB | 552 | CG13749-PB | 423..528 | 358..463 | 305 | 85.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:32:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13749-RB | 897 | CG13749-RB | 75..627 | 16..568 | 2765 | 100 | Plus |
CG13749-RB | 897 | CG13749-RB | 417..522 | 439..544 | 305 | 85.8 | Plus |
CG13749-RB | 897 | CG13749-RB | 498..603 | 358..463 | 305 | 85.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:32:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 8933817..8934108 | 277..568 | 1460 | 100 | Plus |
2R | 25286936 | 2R | 8933497..8933760 | 16..279 | 1320 | 100 | Plus |
2R | 25286936 | 2R | 8933979..8934084 | 358..463 | 305 | 85.8 | Plus |
2R | 25286936 | 2R | 8933898..8934003 | 439..544 | 305 | 85.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:32:55 has no hits.
BS28932.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-19 14:05:27 Download gff for
BS28932.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13749-RB | 76..626 | 17..567 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:33 Download gff for
BS28932.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13749-RB | 76..626 | 17..567 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:52:02 Download gff for
BS28932.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13749-RB | 76..626 | 17..567 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:52:02 Download gff for
BS28932.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8933498..8933759 | 17..278 | 100 | -> | Plus |
2R | 8933819..8934107 | 279..567 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:33 Download gff for
BS28932.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 4821003..4821264 | 17..278 | 100 | -> | Plus |
arm_2R | 4821324..4821612 | 279..567 | 100 | | Plus |
BS28932.pep Sequence
Translation from 16 to 567
> BS28932.pep
MVSPKRRLIDDSIAPSAADLQRTYDGHDGPHVFGTPGNQVYIRGQNDGVY
KVPGVGGQFHHASSPADHVYTDEQGITYVHKKDAGGPGTHTLRGPGLAAV
QPAYSTVQPAGLRNPQFHVERSGRTVDVGSGGFVVQRSRRSPQFHVERPG
RTVDVGSGGFFVQRGRRSPQFPVERPWQRALKD*
BS28932.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:02:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13749-PB | 183 | CG13749-PB | 1..183 | 1..183 | 987 | 100 | Plus |
CG33470-PC | 257 | CG33470-PC | 18..182 | 17..176 | 557 | 61.8 | Plus |
CG33470-PA | 257 | CG33470-PA | 18..182 | 17..176 | 557 | 61.8 | Plus |
IM10-PC | 257 | CG18279-PC | 18..182 | 17..176 | 557 | 61.8 | Plus |
IM10-PA | 257 | CG18279-PA | 18..182 | 17..176 | 557 | 61.8 | Plus |