BS28936.complete Sequence
314 bp assembled on 2012-04-19
GenBank Submission: KX804980
> BS28936.complete
GAAGTTATCAGTCGACATGTCCGATTTCGAGTACGGAATTTGCCCTTACG
ACAAATCGCACCGCATCTTGCTCTTCCGGATGCCCAAGCACTTAATTAAG
TGCGAGAAGAACTACTGTGGACCGCCGCTGCAGACCTGCAAGTACAACGC
CACACACCGAGTCCAGGACATGGAGAAGCATCTGAAGGAGTGTGACTACT
ATCTCCGCAGCATCGAAAACCAGGCGGTGCAGATAGCGCTTCGTAGTCGC
ATACCGCCCAAACAGGAAGATGGACATGATGTGGACACACCATTTTAGAA
GCTTTCTAGACCAT
BS28936.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:32:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14036-RA | 282 | CG14036-PA | 1..282 | 17..298 | 1410 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:32:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14036-RA | 438 | CG14036-RA | 65..346 | 17..298 | 1410 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:32:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 5054671..5054952 | 298..17 | 1410 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:32:34 has no hits.
BS28936.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-19 14:05:24 Download gff for
BS28936.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14036-RA | 53..334 | 17..298 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:27 Download gff for
BS28936.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14036-RA | 65..346 | 17..298 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:51:55 Download gff for
BS28936.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14036-RA | 65..346 | 17..298 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:51:55 Download gff for
BS28936.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5054671..5054952 | 17..298 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:27 Download gff for
BS28936.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 5054671..5054952 | 17..298 | 100 | | Minus |
BS28936.pep Sequence
Translation from 16 to 297
> BS28936.pep
MSDFEYGICPYDKSHRILLFRMPKHLIKCEKNYCGPPLQTCKYNATHRVQ
DMEKHLKECDYYLRSIENQAVQIALRSRIPPKQEDGHDVDTPF*
BS28936.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:02:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14036-PA | 93 | CG14036-PA | 1..93 | 1..93 | 519 | 100 | Plus |
CG32625-PA | 144 | CG32625-PA | 8..70 | 4..64 | 137 | 41.3 | Plus |