Clone BS28937 Report

Search the DGRC for BS28937

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:289
Well:37
Vector:pDNR-Dual
Associated Gene/TranscriptCG34125-RA
Protein status:BS28937.pep: gold
Sequenced Size:512

Clone Sequence Records

BS28937.complete Sequence

512 bp assembled on 2012-04-19

GenBank Submission: KX800812

> BS28937.complete
GAAGTTATCAGTCGACATGTCGAAGCCATCAAAAGCAGGTCCACCAAGCG
AGGGAAGTGCTCCCGCTTACGACTATCGCCATTCCGGCGATGACATGGCC
ATGCGAGCTCCTCCGCCAACGTATGAAGAAAGCCAGCGAAACGGCGGCAC
CGGTGCTGGTGCCTATGGCTATCCACAAGGAGGAGGTGCTCCGCCCAGCC
AGAATCAGTATTACGGCATGATCAGCCACCAGCAACAGCAGATGCCCTTC
AGCGGGCAGCCCAACTACGGTATGACACATGGCAGTGGCTTCGGACTTGC
TGGTCCCAGTACGTCGGCAGGAGCAGCTGCAGCACAGGTCCTTCACTTGG
ACTCACGGGCCGAGGTGAGGACAAATTCCAACGGAAATGTCGTCATTCCG
CCTCCTCCGCCGGGCTGCCTGCCCACACCGGCTCAGTGGGCGGCCATGCA
GGGTCAGCCTGTGGTTCTCAAGCAAAAAAAGCGTTCCTTTTTTTAGAAGC
TTTCTAGACCAT

BS28937.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:33:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG34125-RA 480 CG34125-PA 1..480 17..496 2385 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:33:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG34125-RA 668 CG34125-RA 64..543 17..496 2385 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:33:37
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 4965881..4966274 103..496 1955 99.7 Plus
2L 23513712 2L 4965736..4965822 17..103 435 100 Plus
Blast to na_te.dros performed on 2014-11-28 04:33:38 has no hits.

BS28937.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-19 14:05:31 Download gff for BS28937.complete
Subject Subject Range Query Range Percent Splice Strand
CG34125-RA 43..522 17..496 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:41 Download gff for BS28937.complete
Subject Subject Range Query Range Percent Splice Strand
CG34125-RA 64..543 17..496 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:52:20 Download gff for BS28937.complete
Subject Subject Range Query Range Percent Splice Strand
CG34125-RA 64..543 17..496 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:52:20 Download gff for BS28937.complete
Subject Subject Range Query Range Percent Splice Strand
2L 4965736..4965822 17..103 100 -> Plus
2L 4965882..4966274 104..496 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:41 Download gff for BS28937.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 4965736..4965822 17..103 100 -> Plus
arm_2L 4965882..4966274 104..496 99   Plus

BS28937.pep Sequence

Translation from 16 to 495

> BS28937.pep
MSKPSKAGPPSEGSAPAYDYRHSGDDMAMRAPPPTYEESQRNGGTGAGAY
GYPQGGGAPPSQNQYYGMISHQQQQMPFSGQPNYGMTHGSGFGLAGPSTS
AGAAAAQVLHLDSRAEVRTNSNGNVVIPPPPPGCLPTPAQWAAMQGQPVV
LKQKKRSFF*

BS28937.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:03:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG34125-PA 159 CG34125-PA 1..159 1..159 865 100 Plus