BS28956.complete Sequence
503 bp assembled on 2012-04-19
GenBank Submission: KX802351
> BS28956.complete
GAAGTTATCAGTCGACATGGAGGTGGAATTCAGTAGGGAGAACTTCCTGC
TGCCGGAGATGAAGTACGAGTACCTGGATCACACGGCGGATGTTCAAATC
CACGGATGGGGATCGTCGCTGAAAGAGGCGTTCGAACAGTGCGGAGTGGC
CATGTTTGGATATATGACCGAACTGGATTACGTGTCCGTGGAGCAGTGCT
TTGAAATCGAAGCGCATGGAGATGATCTGGAGAGCTTACTCTTTCACTTT
CTGGACGAGCTGCTGTTCCTGTTCTCTGCCGAACCGTATCTGGTGTGCAA
GAAGCTGGAGATCACCAAGTTCGATGTGGAAAACTTCGAGATTTCCTGCC
ATTGTTACGGGGAACCATTTGAGCTGGGGAAACATCCGCAGGGCACCGAA
GTGAAGGCAATCACATACTCGGCCATGCAAATCATTCAGGACGTGGAGGC
CAGCAACTACGAGGTGTTCGTGATAATTGACATTTGAAAGCTTTCTAGAC
CAT
BS28956.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:34:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6353-RA | 471 | CG6353-PA | 1..471 | 17..487 | 2355 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:34:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6353-RA | 1222 | CG6353-RA | 109..579 | 17..487 | 2355 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:34:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 21661829..21662219 | 487..97 | 1955 | 100 | Minus |
| 3R | 32079331 | 3R | 21662810..21662864 | 71..17 | 275 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:34:35 has no hits.
BS28956.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-19 14:05:35 Download gff for
BS28956.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6353-RA | 95..564 | 17..486 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:53 Download gff for
BS28956.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6353-RA | 109..578 | 17..486 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:52:39 Download gff for
BS28956.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6353-RA | 109..578 | 17..486 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:52:39 Download gff for
BS28956.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 21661830..21662219 | 97..486 | 100 | <- | Minus |
| 3R | 21662719..21662743 | 72..96 | 100 | <- | Minus |
| 3R | 21662810..21662864 | 17..71 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:53 Download gff for
BS28956.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 17488532..17488586 | 17..71 | 100 | | Minus |
| arm_3R | 17487552..17487941 | 97..486 | 100 | <- | Minus |
| arm_3R | 17488441..17488465 | 72..96 | 100 | <- | Minus |
BS28956.pep Sequence
Translation from 16 to 486
> BS28956.pep
MEVEFSRENFLLPEMKYEYLDHTADVQIHGWGSSLKEAFEQCGVAMFGYM
TELDYVSVEQCFEIEAHGDDLESLLFHFLDELLFLFSAEPYLVCKKLEIT
KFDVENFEISCHCYGEPFELGKHPQGTEVKAITYSAMQIIQDVEASNYEV
FVIIDI*
BS28956.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:04:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6353-PA | 156 | CG6353-PA | 1..156 | 1..156 | 828 | 100 | Plus |
