BS28981.complete Sequence
1409 bp assembled on 2012-05-22
GenBank Submission: KX803820
> BS28981.complete
GAAGTTATCAGTCGACATGGCCAAGAACAGCTTTAAGACTTTAATCAGCC
AGAAACACAAAACGTTTCCGGCGGACCTAAATATGTACGGAATGAAGTGT
AAATCGCAGCTGCTGGAGGATCAGGAGAACGTGACCCTGATCATCAATCG
GCGGAACTCAATCCGCCAGAAGCCGAAGAGTTGGGCTTGGACCCTGCTGC
GTTGCAGGTGGCAAAAGAAGCTAGTTCTCTTATTAATATTTATTTGTGTG
TGCGTTCTGATTGTTTTCGCCAACACGCATCTCTTGGTTCGCGGCAACAT
CCTCTCGGCCTTCCTCTCGAGCCGGCTTAACAAGCATTCGCACGCGGAGA
AGCAGGAGGCGAGGTATCCCGACATCCCGGCCACGACCCCGTCAGTTCCC
CCGGTGCTGAGGCCCACGCACTATCTGCTCAACTACTCCTCCACCCAGCT
GGAGCTGAGCTCGCACTTGAACGGTCTGTCCTCAGACTACAACATATTCG
TCATCTACACGCGGGAGAACTACCACTTGAACCTTAAGTTCGACCTGTTC
GCCCACAGCTTGCTGAAGCACACCAGTGCCCAGCTGCATCTGCACGTGAT
CACGGACAGCGAGAGCCAGCCCTCGGTGCTGGAGATCCTGCAGCGACAGA
TCAGGCGGTTCCGGCGGACGGTCATATACACCATATACGACGTGAAGGTC
TGCTCCAGCATCATACAAGACATAGCCGCCAAGTTGTCCCCGTACTTCAG
CTCAACCCCGAACTCGTACTACAGCGACTCCCTCTTTTTCCTGTCCCTCG
GCCTTCACAGGATCGCCGACAGGAGCCTAAACAGAGCCATTCTGCTAGAT
TGTGATATAGTCTTCCGATCCGATGTCCGACTGCTGTTCAATGAGTTCGA
CAACTTTCTGCCGCACCAGCTGTACGGACTGGCACCGGAACTGACCCCCG
TCTACCGCCACATCCTCTACCGCTATCGCGTGCGCTATCCGAAGACCAGT
TTCGGGAATCCCTACTATCCGATCAACAACGAAGGGGGCAACCAACATAG
CCGTGTCCACCACGGCTATCCAGGCCTGAACTCCGGCGTGGTCCTGCTGC
TCCTAAACCGCATCCGTAACTCAAAGTCCTACCTGGAGAAGCTGACCCAC
TCGGAGGTGCACACCCTGGTCGCCAAGTACTCCTTCAAGGGCCACCTCGG
CGACCAGGACTTCTTCACCCTGCTGGGATACGAGTACCCGAACTTAATCT
ACAGACTGGACTGCATTTGGAACCGCCAGCTGTGCACCTGGTGGAAGGAT
CACGGATACTCACAGATATTCGACGCTTATTTCCGGTGCGAGGGCAATAT
TAAAATGTACCATGGCAACTGTAATACGCGAATTCCAGAATAAAAGCTTT
CTAGACCAT
BS28981.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:22:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11388-RA | 1377 | CG11388-PA | 1..1377 | 17..1393 | 6885 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:22:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11388-RA | 1639 | CG11388-RA | 227..1609 | 12..1394 | 6900 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:22:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24022569..24023951 | 12..1394 | 6900 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:22:06 has no hits.
BS28981.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-22 14:15:48 Download gff for
BS28981.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11388-RA | 202..1576 | 17..1391 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:00 Download gff for
BS28981.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11388-RA | 232..1606 | 17..1391 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:41:26 Download gff for
BS28981.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11388-RA | 232..1606 | 17..1391 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:41:26 Download gff for
BS28981.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24022574..24023948 | 17..1391 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:00 Download gff for
BS28981.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19910097..19911471 | 17..1391 | 100 | | Plus |
BS28981.pep Sequence
Translation from 16 to 1392
> BS28981.pep
MAKNSFKTLISQKHKTFPADLNMYGMKCKSQLLEDQENVTLIINRRNSIR
QKPKSWAWTLLRCRWQKKLVLLLIFICVCVLIVFANTHLLVRGNILSAFL
SSRLNKHSHAEKQEARYPDIPATTPSVPPVLRPTHYLLNYSSTQLELSSH
LNGLSSDYNIFVIYTRENYHLNLKFDLFAHSLLKHTSAQLHLHVITDSES
QPSVLEILQRQIRRFRRTVIYTIYDVKVCSSIIQDIAAKLSPYFSSTPNS
YYSDSLFFLSLGLHRIADRSLNRAILLDCDIVFRSDVRLLFNEFDNFLPH
QLYGLAPELTPVYRHILYRYRVRYPKTSFGNPYYPINNEGGNQHSRVHHG
YPGLNSGVVLLLLNRIRNSKSYLEKLTHSEVHTLVAKYSFKGHLGDQDFF
TLLGYEYPNLIYRLDCIWNRQLCTWWKDHGYSQIFDAYFRCEGNIKMYHG
NCNTRIPE*
BS28981.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:36:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11388-PA | 458 | CG11388-PA | 1..458 | 1..458 | 2443 | 100 | Plus |