BS28995.complete Sequence
1553 bp assembled on 2012-04-19
GenBank Submission: KX800263
> BS28995.complete
GAAGTTATCAGTCGACATGGCGTTGACTTACATCCTTTTCCAAGTGGCGG
TCGCCCTACTGGCGATCTTAACGTACTATATCCACCGCAAGCTAACATAT
TTCAAGCGTCGAGGGATTCCCTTCGTTGCACCGCATCTCATCAGGGGAAA
CATGGAGGAATTACAAAAGACGAAAAATATCCACGAGATATTCCAAGATC
ACTATAACAAATTCAGGGAAAGCAAGGCACCGTTTGTTGGATTCTTCTTT
TTCCAGAGTCCCGCTGCATTTGTGATAGATCTTGAACTGGCCAAGCAAAT
ACTGATTAAGGACTTCTCGAATTTCTCGAACAAGGGTATATTCTACAATG
AAAAAGATGATCCCATTTCTGCCCATCTCTTCAATCTGGACGGTGCCCAG
TGGCGTTTGTTAAGGAACAAATTATCATCGACCTTTACATCCGGTAAAAT
GAAGTTAATGTATCCGACCGTAGTGTCAGTGGCCAATGAATTTATGACCG
TGATGCACGAGAAAGTGCCGAAAAATTCGGTTCTGGAGATACGTGATCTG
GTGGCCAGGTTTACGGTGGATGTGATCGGAACCTGCGCCTTTGGCATCCA
GTGCAACAGTCTGCGCGATGAAAAGGCCGAGTTTCTGTATTTTGGAAAGA
GGTCTTTGGTTGACAAGAGACATGGGACTCTATTGAATGGCTTTATGCGC
AGCTATCCCAAATTGGCCAGGAAATTGGGTATGGTTCGAACTGCACCGCA
TATTCAGGAATTCTATAGTAGAATTGTCACAGAAACAGTGGCGGTGCGAG
AAAAAGAGCACATCAAACGCAACGATTTCATGGACATGCTGATTGAACTT
AAAAATCAAAAGGAAATGACTCTAGAGAATGGCGATGTGGTCAGAGGATT
AACCATGGAGGAGGTTTTGGCACAAGCCTTTGTGTTCTTCATTGCTGGCT
TTGAGACATCCTCCTCCACCATGGGATTTGCCCTATACGAACTGGCAAAG
AATCCGGACATTCAAGATAAGGTTCGGGCTGAGGTGGAGGAGGTCATAGA
GCAACATGACCAAAACTTTACCTACGAGTGCACCAAGGATCTGAAGTACC
TCAATCAGGTTTTAGATGAAACTCTGCGACTGTACACCATTGTGCCCAAT
CTGGATCGAATGGCCGCCAAGCGTTACGTAGTTCCCGGTCATCCAAACTT
CGTCATCGAGGCTGGTCAATCGGTCATCATACCCTCATCTGCCATTCACC
ACGATCCCAGCATTTACCCCGAACCCTTTGAGTTCCGACCCGAGCGATTC
TCCCCCGAAGAATCGGCTGGTCGTCCCTCGGTTGCCTGGCTGCCTTTTGG
AGATGGTCCTCGGAACTGCATTGGCCTGAGATTCGGACAGATGCAGGCTC
GCATTGGACTCGCTCTGCTCATCAGGAACTTTAAGTTCTCCACGTGCTCG
AAGACGCCCAATCCTTTGGTCTACGATCCCAAATCATTCGTACTTGGTGT
GAAAGACGGAATCTATCTGAAGGTGGAGACCGTCTAAAAGCTTTCTAGAC
CAT
BS28995.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:35:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp6a8-RA | 1521 | CG10248-PA | 1..1521 | 17..1537 | 7605 | 100 | Plus |
| Cyp6a18-RB | 1524 | CG13977-PB | 8..1433 | 24..1449 | 2450 | 78.1 | Plus |
| Cyp6a18-RA | 1524 | CG13977-PA | 8..1433 | 24..1449 | 2450 | 78.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:35:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp6a8-RA | 1781 | CG10248-RA | 30..1551 | 16..1537 | 7610 | 100 | Plus |
| Cyp6a18-RB | 4171 | CG13977-RB | 40..1465 | 24..1449 | 2450 | 78.1 | Plus |
| Cyp6a18-RA | 1730 | CG13977-RA | 40..1465 | 24..1449 | 2450 | 78.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:35:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14887879..14888981 | 1118..16 | 5515 | 100 | Minus |
| 2R | 25286936 | 2R | 14887401..14887820 | 1537..1118 | 2100 | 100 | Minus |
| 3R | 32079331 | 3R | 27478714..27479808 | 24..1118 | 1710 | 77.1 | Plus |
| 3R | 32079331 | 3R | 27479867..27480198 | 1118..1449 | 745 | 81.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:35:35 has no hits.
BS28995.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-19 14:05:40 Download gff for
BS28995.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a8-RA | 30..1548 | 17..1535 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:03 Download gff for
BS28995.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a8-RA | 31..1549 | 17..1535 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:53:01 Download gff for
BS28995.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a8-RA | 31..1549 | 17..1535 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:53:01 Download gff for
BS28995.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14887403..14887819 | 1119..1535 | 100 | <- | Minus |
| 2R | 14887879..14888980 | 17..1118 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:03 Download gff for
BS28995.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10774908..10775324 | 1119..1535 | 100 | <- | Minus |
| arm_2R | 10775384..10776485 | 17..1118 | 100 | | Minus |
BS28995.pep Sequence
Translation from 16 to 1536
> BS28995.pep
MALTYILFQVAVALLAILTYYIHRKLTYFKRRGIPFVAPHLIRGNMEELQ
KTKNIHEIFQDHYNKFRESKAPFVGFFFFQSPAAFVIDLELAKQILIKDF
SNFSNKGIFYNEKDDPISAHLFNLDGAQWRLLRNKLSSTFTSGKMKLMYP
TVVSVANEFMTVMHEKVPKNSVLEIRDLVARFTVDVIGTCAFGIQCNSLR
DEKAEFLYFGKRSLVDKRHGTLLNGFMRSYPKLARKLGMVRTAPHIQEFY
SRIVTETVAVREKEHIKRNDFMDMLIELKNQKEMTLENGDVVRGLTMEEV
LAQAFVFFIAGFETSSSTMGFALYELAKNPDIQDKVRAEVEEVIEQHDQN
FTYECTKDLKYLNQVLDETLRLYTIVPNLDRMAAKRYVVPGHPNFVIEAG
QSVIIPSSAIHHDPSIYPEPFEFRPERFSPEESAGRPSVAWLPFGDGPRN
CIGLRFGQMQARIGLALLIRNFKFSTCSKTPNPLVYDPKSFVLGVKDGIY
LKVETV*
BS28995.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:05:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp6a8-PA | 506 | CG10248-PA | 1..506 | 1..506 | 2622 | 100 | Plus |
| Cyp6a18-PB | 507 | CG13977-PB | 1..507 | 1..506 | 2133 | 79.1 | Plus |
| Cyp6a18-PA | 507 | CG13977-PA | 1..507 | 1..506 | 2133 | 79.1 | Plus |
| Cyp6a2-PA | 506 | CG9438-PA | 2..506 | 5..506 | 1502 | 54.5 | Plus |
| Cyp6a21-PA | 504 | CG10247-PA | 1..504 | 1..506 | 1433 | 54.7 | Plus |
