Clone BS29005 Report

Search the DGRC for BS29005

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:290
Well:5
Vector:pDNR-Dual
Associated Gene/TranscriptFadd-RA
Protein status:BS29005.pep: full length peptide match
Sequenced Size:752

Clone Sequence Records

BS29005.complete Sequence

752 bp assembled on 2012-04-19

GenBank Submission: KX801492

> BS29005.complete
GAAGTTATCAGTCGACATGACTGCAGGCAGGCACTGGAGCTACGACAGCC
TCAAACAAATCGCCATTGATGGATGCACCGAGAACGTGGAGCAGTTGAAA
CTAATTTTTGTCGAAGAGATTGGTTCGCGACGCAGATCGGATTGCATACG
AACCATCGAGGATTTAATTGACTGCCTGGAACGAGCGGACGAACTATCGG
AGTACAATGTGGAGCCACTGCGCCGGATATCAGGCAATATGCCACAGCTC
ATCGAGGCTCTGAGCGCCTACACAAAGCCGGAAAACATTCTTGGACATCC
GGTTAATCTGTACCAGGAACTCCGATTGGCCGAGGAACTTCGTCAGCAGC
TCCGTATTGCTCCAGCTTCCCAGAATGCTCAGCCATCAGTTTCGGAATTA
GCTGCCGCTGTGCCTCCAACAGCAATCCAAAACTATGCCACCCCAGCTGC
TTTTACGGATCACAAACGAACGATGGTCTTTAAGAAAATATCCGAGGAAC
TGGGTCGCTATTGGCGACGACTGGGCCGATCGGCGGGCATTGGCGAGGGC
CAAATGGACACAATCGAGGAGCGCTACCCGCACGACTTGAAGTCCCAGAT
TCTGCGACTGCTGCAGCTCATCGAAGAGGATGATTGCCACGATCCCAAGC
ACTTTCTGCTTCGTCTGTGTCGCGCCCTGGGCGATTGTGGTCGCAATGAT
CTGCGCAAGAGGGTGGAGCAGATAATGTCGCACTAGAAGCTTTCTAGACC
AT

BS29005.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:14:20
Subject Length Description Subject Range Query Range Score Percent Strand
Fadd-RA 720 CG12297-PA 1..720 17..736 3600 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:14:21
Subject Length Description Subject Range Query Range Score Percent Strand
Fadd-RA 1163 CG12297-RA 109..830 17..738 3610 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:14:17
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 22034563..22035284 17..738 3610 100 Plus
Blast to na_te.dros performed on 2014-11-28 05:14:18 has no hits.

BS29005.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-19 14:04:58 Download gff for BS29005.complete
Subject Subject Range Query Range Percent Splice Strand
BG4-RA 82..801 17..736 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:23:29 Download gff for BS29005.complete
Subject Subject Range Query Range Percent Splice Strand
Fadd-RA 109..828 17..736 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:46:33 Download gff for BS29005.complete
Subject Subject Range Query Range Percent Splice Strand
Fadd-RA 109..828 17..736 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:46:33 Download gff for BS29005.complete
Subject Subject Range Query Range Percent Splice Strand
3R 22034563..22035282 17..736 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:23:29 Download gff for BS29005.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 17860285..17861004 17..736 100   Plus

BS29005.pep Sequence

Translation from 16 to 735

> BS29005.pep
MTAGRHWSYDSLKQIAIDGCTENVEQLKLIFVEEIGSRRRSDCIRTIEDL
IDCLERADELSEYNVEPLRRISGNMPQLIEALSAYTKPENILGHPVNLYQ
ELRLAEELRQQLRIAPASQNAQPSVSELAAAVPPTAIQNYATPAAFTDHK
RTMVFKKISEELGRYWRRLGRSAGIGEGQMDTIEERYPHDLKSQILRLLQ
LIEEDDCHDPKHFLLRLCRALGDCGRNDLRKRVEQIMSH*

BS29005.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:59:14
Subject Length Description Subject Range Query Range Score Percent Strand
Fadd-PA 239 CG12297-PA 1..239 1..239 1240 100 Plus