Clone BS29021 Report

Search the DGRC for BS29021

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:290
Well:21
Vector:pDNR-Dual
Associated Gene/TranscriptCG32225-RA
Protein status:BS29021.pep: gold
Sequenced Size:920

Clone Sequence Records

BS29021.complete Sequence

920 bp assembled on 2012-04-19

GenBank Submission: KX803080

> BS29021.complete
GAAGTTATCAGTCGACATGATGAAACTGTCCGGTCTTAGGCGGTCCTTAC
CCAGGGACCAAGGATTGGGCAACTGCCTCAACGTGGCACTGATTTACTCA
GCGCTCCTAGCACTTTTCATGACCGCCGCCCAGGGACTACAGCTGAGTGC
CTTCACAACGAAGACGCCGCGGGTCAGCAAGTACACAACCAAGTCGCCAT
CGGCCTCCTCCATGAACCACGATGCCACCGCCTCGCTGTATCGTTTCAAT
GCCACCAACGGCATCACCTGCATTCTGATGCAGGTGGACGGACTTATCAG
CATTAAGTACCGGAACAAGCTGAACGAGGATGTGGAGGCCGATTTGTACA
TGCCGGATGATCCCCAGCTGAGTGGCGAGTGCGTCGAGTCCAACATGGAA
ATTCTCACCATGGACTTTAAGGGTTTCCGGCTGTCCATGACATTTAAAAA
GTCGTCCGGCGGCGAGGGTTGGTATATCAACCTGTTTGAACTGACCTACT
CGTCCTCCAACTGGCTGTTCGAGCACCCCGATCGTCCCAACTTGGACGTG
AGGCTGACCTCGCCCGCCCAGACGCCGATGTACTTCCCCACGCCGGTGGG
TAAGTCCTATGTCTGCGACAAGGAGCAGACTGTGATCATGTACGCCCCGC
ACGATTCCGGCGACCTGTCGGGGCATATAGCCAAGCTGTATCTGCGCGAC
ATGCACATGCAGAGCTTCATGTTCAAGGACAGCGGCAAGTGGGGCCCGTC
CTTCCACTGCAGCGCCACAGGATCCTATCGCGACGAGACAGCGCCCCTGG
CCGTGGGAACTGCACTGGCCATTGCCGTGCTACTGACCATATCCGGATAC
GGCGGTTGGAGATACTTCAAAATCAAGAAGGTTCAGTACGGTTCTATGGA
GTGAAAGCTTTCTAGACCAT

BS29021.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:14:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG32225-RA 888 CG32225-PA 1..888 17..904 4440 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:14:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG32225-RA 1293 CG32225-RA 115..1002 17..904 4440 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:14:55
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20304701..20305112 861..450 2060 100 Minus
3L 28110227 3L 20305511..20305760 451..202 1250 100 Minus
3L 28110227 3L 20306067..20306169 119..17 515 100 Minus
3L 28110227 3L 20305821..20305911 203..113 425 97.8 Minus
3L 28110227 3L 20304601..20304645 904..860 225 100 Minus
Blast to na_te.dros performed on 2014-11-28 05:14:57 has no hits.

BS29021.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-19 14:05:00 Download gff for BS29021.complete
Subject Subject Range Query Range Percent Splice Strand
CG32225-RA 90..976 17..903 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:23:32 Download gff for BS29021.complete
Subject Subject Range Query Range Percent Splice Strand
CG32225-RA 115..1001 17..903 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:46:45 Download gff for BS29021.complete
Subject Subject Range Query Range Percent Splice Strand
CG32225-RA 115..1001 17..903 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:46:45 Download gff for BS29021.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20305822..20305904 120..202 100 <- Minus
3L 20306067..20306169 17..119 100   Minus
3L 20304602..20304643 862..903 100 <- Minus
3L 20304701..20305110 452..861 100 <- Minus
3L 20305511..20305759 203..451 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:23:32 Download gff for BS29021.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20298611..20298859 203..451 100 <- Minus
arm_3L 20298922..20299004 120..202 100 <- Minus
arm_3L 20299167..20299269 17..119 100   Minus
arm_3L 20297702..20297743 862..903 100 <- Minus
arm_3L 20297801..20298210 452..861 100 <- Minus

BS29021.pep Sequence

Translation from 16 to 903

> BS29021.pep
MMKLSGLRRSLPRDQGLGNCLNVALIYSALLALFMTAAQGLQLSAFTTKT
PRVSKYTTKSPSASSMNHDATASLYRFNATNGITCILMQVDGLISIKYRN
KLNEDVEADLYMPDDPQLSGECVESNMEILTMDFKGFRLSMTFKKSSGGE
GWYINLFELTYSSSNWLFEHPDRPNLDVRLTSPAQTPMYFPTPVGKSYVC
DKEQTVIMYAPHDSGDLSGHIAKLYLRDMHMQSFMFKDSGKWGPSFHCSA
TGSYRDETAPLAVGTALAIAVLLTISGYGGWRYFKIKKVQYGSME*

BS29021.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:59:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG32225-PA 295 CG32225-PA 1..295 1..295 1552 100 Plus