BS29022.complete Sequence
740 bp assembled on 2012-05-10
GenBank Submission: KX803447
> BS29022.complete
GAAGTTATCAGTCGACATGTCCAAGCCAATTAGATTCTATTACGATTTGT
TGTCCCCGATCGCCCGTGGTCTATGGATTGGTTTAAAATTCAGCAACTCA
CCCGTTGAGTATTGCCCGATTGCCCTGCGAAAATTTGAGCAATTGACCGA
CGAGTACAAGAAGATCAATCGATTCCAGAAGGTGCCCGCCATTGTGGGTG
GGGACTTCCATTTGTCTGAGACCATAGCGATTATAAGATATCTCGCAGAC
AAAGGTCAGTTCGATGAGAAGCTCTACCCAAAGACGCTGGAGAACCGTGC
CCGAGTGGATGAGTTCCTTGAGTGGCAACACCTGAACATTCGTCTTGCAT
GTTCCATGTACTTTCGAGATGCCTGGCTGTTTCCCATGAACGGGATAGCG
CCCAAGCCCAAGCCAGAGCAGATTCAAGCACTGATTGAGGGAGTGGAAAA
CAATCTGGGTTTACTGGAGCGCCTGTGGCTGGAAAATGATTTTTTGGTTG
GGAAAAACCTGACAATGGCTGATATCCTTGGCTCTTCCGAAATCAACCAG
CTGAGGCTCTGCCAATACAGAGTGGACGAGAAAAAGTTCCCAAAGGTGGT
CAAATGGTTGGAACGCGTAAGGGTATCCGCAAATCCCTACCATGACGAGG
GACTGACTTTTATTGACCGAAAATCTAAGCAATCGACGGCGGCAAAGTTG
TAAAAGCTTTCTAGACCATTCGTTGGCGCTCTTAAAGGGG
BS29022.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:55:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstT2-RA | 687 | CG30005-PA | 1..687 | 17..703 | 3435 | 100 | Plus |
GstT1-RA | 687 | CG30000-PA | 97..602 | 113..618 | 295 | 70.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:55:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstT2-RA | 887 | CG30005-RA | 75..762 | 16..703 | 3440 | 100 | Plus |
CG12926-RA | 1347 | CG12926-RA | 1250..1347 | 703..606 | 490 | 100 | Minus |
GstT1-RA | 997 | CG30000-RA | 196..701 | 113..618 | 295 | 70.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:55:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 9607699..9608018 | 236..555 | 1600 | 100 | Plus |
2R | 25286936 | 2R | 9608077..9608225 | 555..703 | 745 | 100 | Plus |
2R | 25286936 | 2R | 9607366..9607489 | 16..139 | 605 | 99.2 | Plus |
2R | 25286936 | 2R | 9607536..9607642 | 135..241 | 520 | 99.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 12:55:50 has no hits.
BS29022.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-10 10:04:42 Download gff for
BS29022.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30005-RA | 76..762 | 17..703 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:48:25 Download gff for
BS29022.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstT2-RA | 76..762 | 17..703 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:17:07 Download gff for
BS29022.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstT2-RA | 76..762 | 17..703 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:17:07 Download gff for
BS29022.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 9607367..9607484 | 17..134 | 100 | -> | Plus |
2R | 9607536..9607638 | 135..237 | 100 | -> | Plus |
2R | 9607701..9608017 | 238..554 | 100 | -> | Plus |
2R | 9608077..9608225 | 555..703 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:48:25 Download gff for
BS29022.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 5494872..5494989 | 17..134 | 100 | -> | Plus |
arm_2R | 5495041..5495143 | 135..237 | 100 | -> | Plus |
arm_2R | 5495206..5495522 | 238..554 | 100 | -> | Plus |
arm_2R | 5495582..5495730 | 555..703 | 100 | | Plus |
BS29022.pep Sequence
Translation from 16 to 702
> BS29022.pep
MSKPIRFYYDLLSPIARGLWIGLKFSNSPVEYCPIALRKFEQLTDEYKKI
NRFQKVPAIVGGDFHLSETIAIIRYLADKGQFDEKLYPKTLENRARVDEF
LEWQHLNIRLACSMYFRDAWLFPMNGIAPKPKPEQIQALIEGVENNLGLL
ERLWLENDFLVGKNLTMADILGSSEINQLRLCQYRVDEKKFPKVVKWLER
VRVSANPYHDEGLTFIDRKSKQSTAAKL*
BS29022.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:29:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstT2-PA | 228 | CG30005-PA | 1..228 | 1..228 | 1199 | 100 | Plus |
GstT1-PA | 228 | CG30000-PA | 1..227 | 1..227 | 828 | 65.6 | Plus |
GstT3-PC | 228 | CG1702-PC | 1..228 | 1..228 | 532 | 47.8 | Plus |
GstT3-PA | 228 | CG1702-PA | 1..228 | 1..228 | 532 | 47.8 | Plus |
GstT3-PB | 268 | CG1702-PB | 41..268 | 1..228 | 532 | 47.8 | Plus |