BS29027.complete Sequence
722 bp assembled on 2012-04-19
GenBank Submission: KX803090
> BS29027.complete
GAAGTTATCAGTCGACATGATAAATTACCGCACACATGAACTGAGTGGTT
CGCCATCGATGCCCCGTCGCCGCCAGATCGGGCATACTTCCGGCCATTGT
AATGTGCGCTGCGATGGCTGCGGCAACAATAGGATGACCTTCTATCGCTA
CAAGTGCCTGCACTGCCTGGACTATGATCTTTGCTCCGACTGCAAGGAAA
ATGGGGTCTCAAACGGGTTGCACAGTCTGGATCATCCGCTCCAGTGCCTA
ATGGATCGTGATGCACTTGAGCTGCACTTCGCCGGTGAGCCGATTCCGAT
ATTGTGCGCCGACAGCTTCACGTGCCCAGTGTGCGGTGAAATGGGCTTTT
CCGTAGAGGATCTGAGGACGCACTGCCAAGATAATCATCGCATGGCGCGC
ACAGTTTGCATTTGCCCAGTCTGCGCGGCGGTCCCATTGTCGCAACCGAG
TCACATTGCTCACATTGCCAATCACTTGATGTTCTCGCCATCGCATCGCG
CTACAGGGGATCCGATGATCGATATCAGCGCCACTTCCCAGGCTGAGGGC
TCCAGTTTGCCCCAGAACTCTGCCGTGAGCTCTGGATCTGGCGCTCAACA
CACTTTTTCCAGCTCGGAAAATTCCCAGGTGCGCTTCCTTCTACCCGGAA
ACAGAGCTCCCTTAGCTGATTCCGACGATTTTAACATGGACAATTGGGAG
GTATAAAAGCTTTCTAGACCAT
BS29027.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:15:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3526-RA | 690 | CG3526-PA | 1..690 | 17..706 | 3450 | 100 | Plus |
| CG3526-RC | 666 | CG3526-PC | 2..666 | 42..706 | 3325 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:15:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3526-RA | 1084 | CG3526-RA | 46..737 | 17..708 | 3460 | 100 | Plus |
| CG3526-RC | 860 | CG3526-RC | 115..781 | 42..708 | 3335 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:15:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2893220..2893885 | 43..708 | 3330 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 05:15:24 has no hits.
BS29027.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-19 14:05:03 Download gff for
BS29027.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3526-RA | 46..733 | 17..704 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:23:39 Download gff for
BS29027.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3526-RA | 46..733 | 17..704 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:46:51 Download gff for
BS29027.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3526-RA | 46..733 | 17..704 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:46:51 Download gff for
BS29027.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2893132..2893158 | 17..43 | 100 | -> | Plus |
| X | 2893221..2893881 | 44..704 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:23:39 Download gff for
BS29027.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2787165..2787191 | 17..43 | 100 | -> | Plus |
| arm_X | 2787254..2787914 | 44..704 | 100 | | Plus |
BS29027.pep Sequence
Translation from 16 to 705
> BS29027.pep
MINYRTHELSGSPSMPRRRQIGHTSGHCNVRCDGCGNNRMTFYRYKCLHC
LDYDLCSDCKENGVSNGLHSLDHPLQCLMDRDALELHFAGEPIPILCADS
FTCPVCGEMGFSVEDLRTHCQDNHRMARTVCICPVCAAVPLSQPSHIAHI
ANHLMFSPSHRATGDPMIDISATSQAEGSSLPQNSAVSSGSGAQHTFSSS
ENSQVRFLLPGNRAPLADSDDFNMDNWEV*
BS29027.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:00:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3526-PA | 229 | CG3526-PA | 1..229 | 1..229 | 1263 | 100 | Plus |
| CG3526-PC | 221 | CG3526-PC | 1..221 | 9..229 | 1216 | 99.5 | Plus |
| CG11984-PI | 599 | CG11984-PI | 2..160 | 25..194 | 301 | 38 | Plus |
| CG11984-PH | 599 | CG11984-PH | 2..160 | 25..194 | 301 | 38 | Plus |
| CG11984-PG | 599 | CG11984-PG | 2..160 | 25..194 | 301 | 38 | Plus |
