BS29030.complete Sequence
866 bp assembled on 2012-04-19
GenBank Submission: KX801527
> BS29030.complete
GAAGTTATCAGTCGACATGCCCGTCTACGTCGGCCTGCTGATTAAGACTA
CGGCCCAACTGTTGTCGCATCCCATGGAGCTAGTTCGTGTGAATATGCAG
GCGAACGTAATCCACCATAGCCGTTTAAGCATAAACCATATGTTCCGGCT
GATGGCCCGTCATGGATTACCCGGATTTTATTACGGCATTGTGGCTGCTT
GTCTACGCTGTACTGTTCACACGATGTCAACGTACACGTTGTTCTACAAC
TTACAGGATAACAAGTACGTCCTAATGCTGCAGCCGTATAACACTAGCAT
GGTCCTGGGTATAACCGGATTTTGGGGCGGCGTATTGGCAACACCGTTCG
CCAAGCTGGCGGTCATTCGGCAAGCTGATCTTACGCGCGGATCCTACGAG
AGGCGCAACTATCGAAATTTCTGGAGAGGACTCAAATGTATGTACGCGAA
GGGAGGATTTACTTACCTATTTACCGGTTGGAAAATAAACTCGATTAGTA
GCACAGCCGTGGCCGTGCTGTATACTCCTATTAGTGATAAGGTCCATACA
GTGATATCATGGTTCCACAGACTCGACGAGCCGTGGCTTAGCGATCTCAT
AACTATGGCGCTAACAGGCAGTATTATCACAGTCATTATGACACCAGTGG
ATGCGTTGGCTACTCTAACGTTAAACGAATCCTCACACTATGGCCGCACT
TCCTATCCATATCTGTATCGGAAAATTATCCGAAAACATGGCTACAAGGG
CTTCTTTTTTGGATGGAAACCGGCACTAATGGCCCTTATCCCACATACTG
TTTTGGCAACGTTTGTATATCGCTTCTTACTAGATCGCTATATAACATAA
AAGCTTTCTAGACCAT
BS29030.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:15:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16736-RA | 834 | CG16736-PA | 1..834 | 17..850 | 4170 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:15:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16736-RA | 908 | CG16736-RA | 39..873 | 17..851 | 4175 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:15:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9256724..9257166 | 851..409 | 2215 | 100 | Minus |
| 3R | 32079331 | 3R | 9257287..9257678 | 408..17 | 1960 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 05:15:34 has no hits.
BS29030.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-19 14:05:04 Download gff for
BS29030.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16736-RA | 39..870 | 17..848 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:23:41 Download gff for
BS29030.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16736-RA | 39..870 | 17..848 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:46:56 Download gff for
BS29030.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16736-RA | 39..870 | 17..848 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:46:56 Download gff for
BS29030.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9256727..9257166 | 409..848 | 100 | <- | Minus |
| 3R | 9257287..9257678 | 17..408 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:23:41 Download gff for
BS29030.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5082449..5082888 | 409..848 | 100 | <- | Minus |
| arm_3R | 5083009..5083400 | 17..408 | 100 | | Minus |
BS29030.pep Sequence
Translation from 16 to 849
> BS29030.pep
MPVYVGLLIKTTAQLLSHPMELVRVNMQANVIHHSRLSINHMFRLMARHG
LPGFYYGIVAACLRCTVHTMSTYTLFYNLQDNKYVLMLQPYNTSMVLGIT
GFWGGVLATPFAKLAVIRQADLTRGSYERRNYRNFWRGLKCMYAKGGFTY
LFTGWKINSISSTAVAVLYTPISDKVHTVISWFHRLDEPWLSDLITMALT
GSIITVIMTPVDALATLTLNESSHYGRTSYPYLYRKIIRKHGYKGFFFGW
KPALMALIPHTVLATFVYRFLLDRYIT*
BS29030.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:00:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16736-PA | 277 | CG16736-PA | 1..277 | 1..277 | 1471 | 100 | Plus |
| Dic1-PC | 280 | CG8790-PC | 11..268 | 4..268 | 229 | 29.2 | Plus |
| Dic1-PA | 280 | CG8790-PA | 11..268 | 4..268 | 229 | 29.2 | Plus |
| Dic1-PB | 280 | CG8790-PB | 11..268 | 4..268 | 229 | 29.2 | Plus |
| Dic3-PA | 287 | CG11196-PA | 26..273 | 17..268 | 187 | 25 | Plus |
