Clone BS29034 Report

Search the DGRC for BS29034

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:290
Well:34
Vector:pDNR-Dual
Associated Gene/TranscriptCG7715-RA
Protein status:BS29034.pep: full length peptide match
Sequenced Size:689

Clone Sequence Records

BS29034.complete Sequence

689 bp assembled on 2012-04-19

GenBank Submission: KX806358

> BS29034.complete
GAAGTTATCAGTCGACATGAAAGTATTCGCATTGTGCTTCTTGAGCCTGC
TGGCTTTGAGCCAGGCCCGCTTGGACTACACGCTGCAGTGCGCCCGCGGT
GAGATCAGTATCCGCTGGCCCAGCTACCACAGCAACTCGGAGTACTATGT
GTGCCCGAGCGTCTACGGCAGCCAGTTGACTGTCCACTGTCCGGCCGGCC
AGGTCTTCACCTTTGTCCTCCAGAAGTGCGTGTCGCCAGCCCACTATATC
CCAGCTCCCTCAATGGAAGTCCTGCCCACCGCTGCTCCCATCACCATGCA
GGTTATCGAGAATGCACCACCAGTGATCTCCGCACTGTCTCAGCCAGAGG
CCGAGACTCCGGAGCACCATGAGCATCAGGAGCACCACGAGCATAATGAG
GAGGAGGTTGAGGCACACCCCATCCCACCAACCCCGGCCCCAGAGCCACC
AACCCCACCCACCGTTGCTATTAAGCCAGCTGTGCCCGTGCCCGGCAAGA
AGGTCACGGTCCCCCAGCCCGGCAAGAAGGCCACCGTTCCTGTGCCCTCC
AAGGCAGCCATGGCGAAGAAGCCCAGCGCCGCTCCCAAGAAGCCAGCTGC
TCCGACTCCATCCAAGGCCGCCAAGAAGCCAACGCCACCCAGCAAGGCCC
AGAAGAAGCCAGCCACCGCTTAAAAGCTTTCTAGACCAT

BS29034.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:15:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG7715-RA 657 CG7715-PA 1..657 17..673 3285 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:15:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG7715-RA 823 CG7715-RA 55..712 17..674 3290 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:15:00
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 18727684..18728336 674..22 3265 100 Minus
Blast to na_te.dros performed on 2014-11-28 05:15:01 has no hits.

BS29034.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-19 14:05:01 Download gff for BS29034.complete
Subject Subject Range Query Range Percent Splice Strand
CG7715-RA 55..709 17..671 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:23:34 Download gff for BS29034.complete
Subject Subject Range Query Range Percent Splice Strand
CG7715-RA 55..709 17..671 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:46:46 Download gff for BS29034.complete
Subject Subject Range Query Range Percent Splice Strand
CG7715-RA 55..709 17..671 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:46:46 Download gff for BS29034.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18727687..18728340 17..671 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:23:34 Download gff for BS29034.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 14553409..14554062 17..671 99   Minus

BS29034.pep Sequence

Translation from 16 to 672

> BS29034.pep
MKVFALCFLSLLALSQARLDYTLQCARGEISIRWPSYHSNSEYYVCPSVY
GSQLTVHCPAGQVFTFVLQKCVSPAHYIPAPSMEVLPTAAPITMQVIENA
PPVISALSQPEAETPEHHEHQEHHEHNEEEVEAHPIPPTPAPEPPTPPTV
AIKPAVPVPGKKVTVPQPGKKATVPVPSKAAMAKKPSAAPKKPAAPTPSK
AAKKPTPPSKAQKKPATA*

BS29034.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:59:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG7715-PA 218 CG7715-PA 1..218 1..218 1163 100 Plus