BS29039.complete Sequence
776 bp assembled on 2012-04-19
GenBank Submission: KX802699
> BS29039.complete
GAAGTTATCAGTCGACATGTTCTTATTAAACATTCCTTGGAGTGGACACA
CTGGCCGCACGGCTTTTCACATTGTCATTTTCCAGGAGCTAGGCGTTGAA
AATTTGTTAAAAATGTCCCAATCAAAGGTTCCTCATATTGTGGGCGATGA
TGATGAATATCAAGAAGCTACTGCTCCCGAAAGTGACGAGATTACCTGCG
AGTCTTCTGTGGAAAGTGATCAAGATGATGACTGTTCCAACGAAGATGAT
ATGGATTTGGATGGGGCAGACTGGTCCCCATATGTCACTTATGAGGCGGG
TACACCAAGACGTCCCCACAGTGCTTTGGAGATTACCGAAATTACCGAGT
TTCCGAAAATTCCAAAGAAAAACCCCACCTCACCCGAACTGGTGATACAG
AAGCCAGAGACTCCGGATCAAAACGACTCGGGATCTCAGGAGCGTCTCAC
CTTCTCTCGCGCCAATAATGCGCTATCAGAGTCCATTGGAGCTCGCGTTT
CCCAACGTAGCAGGGGCAACTTGGAACCATTCATCCGTAGAATGGCACGT
AGCCCTACGCCCGAGGCCTCAGAGGAAAACGGCTCGGTATCACAAGGTCA
GCTGCTGGCCAAGCCCGTGGATGTCACCGAGTTCTTTCACCGCATTGCTG
TGGGTCTCGTCGAGCAGCGCGTCTGCTTGAAGCCTTTCTTGGCATTGCGC
AAACATATTGCTCAACTGGTGGGTCAGACTTTGAAGAAATCCAAGAGGAT
GCGCCGTTAAAAGCTTTCTAGACCAT
BS29039.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:16:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14932-RB | 648 | CG14932-PB | 1..648 | 113..760 | 3240 | 100 | Plus |
| CG14932-RC | 609 | CG14932-PC | 99..609 | 250..760 | 2555 | 100 | Plus |
| CG14932-RC | 609 | CG14932-PC | 1..98 | 113..210 | 490 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:16:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14932-RB | 808 | CG14932-RB | 1..733 | 28..760 | 3665 | 100 | Plus |
| CG14932-RC | 769 | CG14932-RC | 184..694 | 250..760 | 2555 | 100 | Plus |
| CG14932-RC | 769 | CG14932-RC | 1..183 | 28..210 | 915 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:16:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 11790483..11790936 | 307..760 | 2270 | 100 | Plus |
| 2L | 23513712 | 2L | 11789908..11790007 | 17..116 | 500 | 100 | Plus |
| 2L | 23513712 | 2L | 11790059..11790115 | 115..171 | 285 | 100 | Plus |
| 2L | 23513712 | 2L | 11790370..11790426 | 250..306 | 285 | 100 | Plus |
| 2L | 23513712 | 2L | 11790172..11790215 | 168..211 | 205 | 97.7 | Plus |
| 2L | 23513712 | 2L | 11790272..11790310 | 211..249 | 195 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 05:16:12 has no hits.
BS29039.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-19 14:05:06 Download gff for
BS29039.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14932-RB | 126..862 | 22..758 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:23:45 Download gff for
BS29039.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14932-RB | 37..773 | 22..758 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:47:09 Download gff for
BS29039.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14932-RB | 1..731 | 28..758 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:47:09 Download gff for
BS29039.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 11789913..11790005 | 22..114 | 100 | -> | Plus |
| 2L | 11790059..11790115 | 115..171 | 100 | -> | Plus |
| 2L | 11790176..11790214 | 172..210 | 100 | -> | Plus |
| 2L | 11790272..11790310 | 211..249 | 100 | -> | Plus |
| 2L | 11790370..11790426 | 250..306 | 100 | -> | Plus |
| 2L | 11790483..11790934 | 307..758 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:23:45 Download gff for
BS29039.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 11789913..11790005 | 22..114 | 100 | -> | Plus |
| arm_2L | 11790059..11790115 | 115..171 | 100 | -> | Plus |
| arm_2L | 11790176..11790214 | 172..210 | 100 | -> | Plus |
| arm_2L | 11790272..11790310 | 211..249 | 100 | -> | Plus |
| arm_2L | 11790370..11790426 | 250..306 | 100 | -> | Plus |
| arm_2L | 11790483..11790934 | 307..758 | 100 | | Plus |
BS29039.pep Sequence
Translation from 16 to 759
> BS29039.pep
MFLLNIPWSGHTGRTAFHIVIFQELGVENLLKMSQSKVPHIVGDDDEYQE
ATAPESDEITCESSVESDQDDDCSNEDDMDLDGADWSPYVTYEAGTPRRP
HSALEITEITEFPKIPKKNPTSPELVIQKPETPDQNDSGSQERLTFSRAN
NALSESIGARVSQRSRGNLEPFIRRMARSPTPEASEENGSVSQGQLLAKP
VDVTEFFHRIAVGLVEQRVCLKPFLALRKHIAQLVGQTLKKSKRMRR*
BS29039.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:00:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14932-PB | 215 | CG14932-PB | 1..215 | 33..247 | 1109 | 100 | Plus |
| CG14932-PC | 202 | CG14932-PC | 1..202 | 33..247 | 1011 | 94 | Plus |
