BS29047.complete Sequence
827 bp assembled on 2012-04-19
GenBank Submission: KX805236
> BS29047.complete
GAAGTTATCAGTCGACATGTTCGACATCACCTGGCTGCCCACCGCCTGCG
GATCGCTGGCTCCGGCCCTCATCCCGCCAGCGCATATCGTCATCCTGTGG
TACTTCTGGGAGAACTATGCCCGCTACGTGGACAGGCACTTCTGCACCTG
CTCCTGTTGGGACACCGTCTTCAAGGGACCCTACGAGTCGGGCGTGGCGG
CCTACAAGCATATGTACTTCAATGCCACGCCCAACAGCTTCAAGATGTGG
ATTCTGACCGTGTTCGCCGTGATTGCCCTGTACGAGTGCATCAAGAGGCT
AATCGCCCTGATCCTCCAGCAGCGCGTACGGTACTCCATGCTGTTGCTTT
TCCTGCTCTCGATATTTTCGCATTACTACGCCTGGTGGGCGTACATCAAC
TACTACAACGATGACTACTACAATCAGTGGAACCACCAGCTCTTCTTCAC
GGTAACCGAGTTGTTTTCAACGGTCCTAGTGATGCACCTGGCCAACACCA
CCAACGTGGTCACGCCAAAGAAAGTCTTCTGCATTGTCGGCATCGCCCTG
CTGCACATCCTGGCCAGCAGTTTTGATCAGTTCTTCATGAATGTGGTGCG
CGGCGAGGGTTACGCCCACCAGATAGTGCGAGACATCGGGTTCATGGTGC
CTGATCTTCTACAGCTCTTCGTCCCAGTTTGGCTGCTACGACAGACACGT
CGCGAATGTTATACCACGCGACCCTTCCACCGAGATCGGAAACTCCATCG
GGATATTGTGTTGATGCTGTGCCTGGTGTCGCTGCTCTTTGTCATCTGCA
CGGTTTTGTGAAAGCTTTCTAGACCAT
BS29047.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:15:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9760-RD | 915 | CG9760-PD | 1..795 | 17..811 | 3975 | 100 | Plus |
| CG9760-RC | 795 | CG9760-PC | 1..795 | 17..811 | 3975 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:15:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9760-RD | 2039 | CG9760-RD | 338..1132 | 17..811 | 3975 | 100 | Plus |
| CG9760-RC | 2039 | CG9760-RC | 338..1132 | 17..811 | 3975 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:15:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12159144..12159582 | 455..17 | 2195 | 100 | Minus |
| 3L | 28110227 | 3L | 12157959..12158327 | 811..443 | 1815 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 05:15:44 has no hits.
BS29047.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-19 14:05:05 Download gff for
BS29047.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9760-RC | 343..1131 | 22..810 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:23:42 Download gff for
BS29047.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9760-RC | 343..1131 | 22..810 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:46:59 Download gff for
BS29047.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9760-RC | 343..1131 | 22..810 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:46:59 Download gff for
BS29047.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12157960..12158318 | 452..810 | 100 | <- | Minus |
| 3L | 12159148..12159577 | 22..451 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:23:42 Download gff for
BS29047.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12151060..12151418 | 452..810 | 100 | <- | Minus |
| arm_3L | 12152248..12152677 | 22..451 | 100 | | Minus |
BS29047.pep Sequence
Translation from 16 to 810
> BS29047.pep
MFDITWLPTACGSLAPALIPPAHIVILWYFWENYARYVDRHFCTCSCWDT
VFKGPYESGVAAYKHMYFNATPNSFKMWILTVFAVIALYECIKRLIALIL
QQRVRYSMLLLFLLSIFSHYYAWWAYINYYNDDYYNQWNHQLFFTVTELF
STVLVMHLANTTNVVTPKKVFCIVGIALLHILASSFDQFFMNVVRGEGYA
HQIVRDIGFMVPDLLQLFVPVWLLRQTRRECYTTRPFHRDRKLHRDIVLM
LCLVSLLFVICTVL*
BS29047.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:00:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9760-PC | 264 | CG9760-PC | 1..264 | 1..264 | 1438 | 100 | Plus |
| CG9760-PD | 304 | CG9760-PD | 1..264 | 1..264 | 1438 | 100 | Plus |
