Clone BS29067 Report

Search the DGRC for BS29067

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:290
Well:67
Vector:pDNR-Dual
Associated Gene/TranscriptCG12641-RA
Protein status:BS29067.pep: full length peptide match
Sequenced Size:452

Clone Sequence Records

BS29067.complete Sequence

452 bp assembled on 2012-04-19

GenBank Submission: KX801973

> BS29067.complete
GAAGTTATCAGTCGACATGAAGATTCCGCCGGCCAGGTCGCCGTCACAGT
TGGCTCCACCGGCACAGCTGCGCAAGACGGCCAGTGTGCGCGATGATCCA
GCTGGTCTGGCCAAGCGACGGAGTCGCCTCCAGGAGATCCGGGCTGCCAG
CAGTAGTGCGGGTGGTGGTGGTGGTGGCGGCGAGGCAGCTGCCGCCTTCA
CCAAGCGGGAATCCAAGCGGGATCGTCGACGTGGAGGAGGAGGAGGAGCA
GGAGCAGCAGCAGCAGCAGCAGCAGGAAGTGGTAGCAGCGGCAGTGGATC
CCAGTCGCCCACCATGCGCAAATCGCATTCCCTGGACGCCGCCGAGAGCT
ACACGTTGGCCAGCATCCAGGCGCCGCTCTGGGTGACCCTCACCAATGCT
CGCACCATCGACGAGCTGGCCCAGCAAAAGATGTGAAAGCTTTCTAGACC
AT

BS29067.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:16:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG43740-RC 1491 CG43740-PC 1072..1491 17..436 2100 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:16:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG43740-RC 1878 CG43740-RC 1205..1625 17..437 2105 100 Plus
CG43740-RB 1850 CG43740-RB 1177..1597 17..437 2105 100 Plus
CG43740-RA 1878 CG43740-RA 1205..1625 17..437 2105 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:16:49
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 10347121..10347541 17..437 2105 100 Plus
Blast to na_te.dros performed on 2014-11-28 05:16:50 has no hits.

BS29067.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-19 14:05:10 Download gff for BS29067.complete
Subject Subject Range Query Range Percent Splice Strand
CG12641-RA 717..1135 17..435 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:23:54 Download gff for BS29067.complete
Subject Subject Range Query Range Percent Splice Strand
CG43740-RA 1205..1623 17..435 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:47:21 Download gff for BS29067.complete
Subject Subject Range Query Range Percent Splice Strand
CG43740-RA 1205..1623 17..435 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:47:21 Download gff for BS29067.complete
Subject Subject Range Query Range Percent Splice Strand
X 10347121..10347539 17..435 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:23:54 Download gff for BS29067.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 10241154..10241572 17..435 100   Plus

BS29067.pep Sequence

Translation from 16 to 435

> BS29067.pep
MKIPPARSPSQLAPPAQLRKTASVRDDPAGLAKRRSRLQEIRAASSSAGG
GGGGGEAAAAFTKRESKRDRRRGGGGGAGAAAAAAAGSGSSGSGSQSPTM
RKSHSLDAAESYTLASIQAPLWVTLTNARTIDELAQQKM*

BS29067.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:00:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG43740-PC 496 CG43740-PC 358..496 1..139 687 100 Plus