Clone BS29069 Report

Search the DGRC for BS29069

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:290
Well:69
Vector:pDNR-Dual
Associated Gene/Transcriptmit(1)15-RC
Protein status:BS29069.pep: full length peptide match
Sequenced Size:1490

Clone Sequence Records

BS29069.complete Sequence

1490 bp assembled on 2012-04-19

GenBank Submission: KX801270

> BS29069.complete
GAAGTTATCAGTCGACATGGAGGAAGAGGCGCCGCGGTTCAATGTGCTGG
AGGAGGCGTTCAACGGCAATGGGAACGGGTGCGCCAACGTGGAGGCCACC
CAATCGGCCATATTAAAAGTGCTGACGCGCGTTAATCGCTTCCAGATGCG
CGTCCGCAAGCACATCGAAGACAACTACACGGAGTTTTTGCCCAACAACA
CGTCGCCGGACATATTTCTGGAGGAGTCGGGGTCCTTGAATCGCGAGATT
CACGACATGCTCGAGAACTTGGGCTCCGAGGGACTGGACGCCTTGGACGA
GGCGAATGTCAAGATGGCGGGTAACGGCAGGCAGCTGCGAGAGATCCTTT
TGGGTCTGGGTGTCAGCGAGCATGTGCTAAGGATCGACGAGCTGTTCCAG
TGCGTGGAGGAGGCCAAGGCCACCAAGGATTACTTGGTGTTACTGGACCT
TGTCGGTCGTTTGAGGGCTTTCATCTATGGCGATGATTCCGTTGACGGGG
ACGCGCAGGTGGCCACGCCAGAGGTTCGACGCATCTTTAAGGCTCTCGAG
TGCTACGAGACCATCAAGGTGAAATACCATGTACAGGCATATATGCTGCA
GCAGAGCCTCCAGGAGCGCTTCGATCGCCTGGTGCAGCTGCAGTGTAAAT
CCTTTCCCACATCGCGTTGCGTCACCTTGCAGGTGAGCCGGGATCAAACG
CAGCTGCAGGATATTGTGCAGGCTCTCTTCCAGGAGCCCTACAATCCGGC
GCGCCTCTGCGAATTCCTGCTGGACAATTGCATAGAACCGGTGATCATGC
GCCCAGTGATGGCCGATTACAGCGAAGAAGCCGATGGTGGCACCTACGTT
CGATTGTCGCTTTCCTACGCCACCAAGGAGCCCAGCTCAGCGCAGCTTCG
CCCGAACTACAAGCAGGTCTTGGAGAACCTCAGGCTGCTGCTGCACACGC
TGGCCGGGATCAACTGCAGTGTGTCCAGGGACCAACATGTTTTTGGCATT
ATTGGCGATCATGTGAAGGATAAAATGCTGAAATTACTGGTGGACGAGTG
CCTGATACCAGCTGTGCCCGAAAGCACGGAGGAGTATCAGACATCCACGC
TGTGTGAGGATGTCGCCCAGCTGGAGCAGCTGCTTGTAGACTCATTCATC
ATCAATCCCGAGCAAGATCGAGCCCTAGGGCAGTTTGTAGAGAAGTACGA
GACCTACTACCGCAATCGGATGTATCGTCGAGTTCTGGAAACGGCGCGGG
AGATCATCCAGCGCGATCTGCAGGACATGGTGCTGGTGGCGCCCAACAAC
CACTCAGCCGAAGTGGCAAACGATCCCTTCCTCTTCCCACGCTGCATGAT
CTCGAAAAGTGCTCAGGTAAGTCGTTCGCTAAACGAAACGATTGATTACG
CACTAATGGATTCATTTTCGCCGGCAGGACTTTGTCAAACTAATGGACCG
CATTCTTCGCCAGCCCACGGATAAAAGCTTTCTAGACCAT

BS29069.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:17:03
Subject Length Description Subject Range Query Range Score Percent Strand
Zw10-RB 2166 CG9900-PB 1..1351 17..1367 6725 99.9 Plus
Zw10-RB 2166 CG9900-PB 1348..1398 1425..1475 255 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:17:04
Subject Length Description Subject Range Query Range Score Percent Strand
Zw10-RB 2567 CG9900-RB 104..1457 14..1367 6740 99.9 Plus
Zw10-RB 2567 CG9900-RB 1454..1504 1425..1475 255 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:17:01
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2604300..2605761 14..1475 7280 99.9 Plus
Blast to na_te.dros performed on 2014-11-28 05:17:02 has no hits.

BS29069.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-19 14:05:11 Download gff for BS29069.complete
Subject Subject Range Query Range Percent Splice Strand
mit(1)15-RC 113..1568 17..1472 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:23:56 Download gff for BS29069.complete
Subject Subject Range Query Range Percent Splice Strand
mit(1)15-RB 107..1457 17..1367 99 == Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:47:25 Download gff for BS29069.complete
Subject Subject Range Query Range Percent Splice Strand
Zw10-RB 107..1457 17..1367 99 == Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:47:25 Download gff for BS29069.complete
Subject Subject Range Query Range Percent Splice Strand
X 2604303..2605758 17..1472 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:23:56 Download gff for BS29069.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 2498336..2499791 17..1472 99   Plus

BS29069.pep Sequence

Translation from 16 to 1473

> BS29069.pep
MEEEAPRFNVLEEAFNGNGNGCANVEATQSAILKVLTRVNRFQMRVRKHI
EDNYTEFLPNNTSPDIFLEESGSLNREIHDMLENLGSEGLDALDEANVKM
AGNGRQLREILLGLGVSEHVLRIDELFQCVEEAKATKDYLVLLDLVGRLR
AFIYGDDSVDGDAQVATPEVRRIFKALECYETIKVKYHVQAYMLQQSLQE
RFDRLVQLQCKSFPTSRCVTLQVSRDQTQLQDIVQALFQEPYNPARLCEF
LLDNCIEPVIMRPVMADYSEEADGGTYVRLSLSYATKEPSSAQLRPNYKQ
VLENLRLLLHTLAGINCSVSRDQHVFGIIGDHVKDKMLKLLVDECLIPAV
PESTEEYQTSTLCEDVAQLEQLLVDSFIINPEQDRALGQFVEKYETYYRN
RMYRRVLETAREIIQRDLQDMVLVAPNNHSAEVANDPFLFPRCMISKSAQ
VSRSLNETIDYALMDSFSPAGLCQTNGPHSSPAHG*

BS29069.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:00:54
Subject Length Description Subject Range Query Range Score Percent Strand
Zw10-PB 721 CG9900-PB 1..450 1..450 2306 100 Plus