Clone BS29103 Report

Search the DGRC for BS29103

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:291
Well:3
Vector:pDNR-Dual
Associated Gene/TranscriptCG14100-RA
Protein status:BS29103.pep: full length peptide match
Sequenced Size:1256

Clone Sequence Records

BS29103.complete Sequence

1256 bp assembled on 2012-04-25

GenBank Submission: KX802864

> BS29103.complete
GAAGTTATCAGTCGACATGCTGTGTAATATATTTAAACGCTCGCTTCAAG
CGAATATAAGGAATGTGAATAACTTAAATGTGCTGCGGTTGAGCAGTTCC
AGTGGTCCCCGAGGAGAGATCCAGGACGCACTGGACATAGAGGCCAATCT
ATTCGGGAATTCAGATTTAAGGCATGAGCCGATGAACACGAGGGAAGCTT
TACGCAAGAATCGATTTGCCGGTAGAAAACCAAAGGTGCCATTTGCCTCA
GTTGCATCTCGCAACCTCTCAGCTCCATCTAATCCTGCACCACGAGTGGC
TCCAACTCCCGCTCCAGTAATTAAGGACAATGAGCTGAATCTGGAGTTTG
TGCGTCTCACTCTGCAGGATCCACTTACCAGCACCCTACTAACCACAGTG
CGCTCCCGCAAGCGCCGTGATAAGAACCGGCAGATCATCGTCGAAGGCCG
TCGTCTCATCCAGGAAGCCCTGCAATGTGGTCTCAAAATGGAAGTACTCC
TCTTCTCCCAGAAAGATCAGTTGGCTCTGGTCAAGGAGGAAGTAGGCGTG
GCACAGGTGGAGACGGGTACCAAGATTTACAAAGTGCCGCAGCACGACCT
AAAGACGTGGTCATCGCTGGTAACTCCTCCCGGTCTGATGGCTATCTTCG
ACAGGCCGTCGGACAAAGGCTTGGAGAAAAACCTGGCGGAGCAACAGCGT
CTGGGCTCTCAGCCCTTTCCCATTACAGTTGTGTGCGACAACATCAGGGA
GCCCAACAATCTGGGCAGCATTATAAGGACCTGCGCCGCGCTGCCCTGCA
GTCAGGTGGTGGTCACCCACGGCTGCTGTGATCCCTGGGAATCGAAGGCC
CTGAGAGGAGGCTGTGGCGGTCAGTTTAGAGTTCCAATTCGGGATGATGT
AACTTGGGATGAGCTCGCGCTAACCATTCCGCCAGAGGCGGCCGACGACT
GTCATGTTTTCATTGCCGAGACCAACCAAAGGAAGCGGGAGAACAACCAG
ACCATTGACTATGCAGATATCAAGGGTCTTGGAGCCCATAACTTGCTCAT
TATTGGCGGAGAGAGTCACGGAGTCAGTGAGGAAGCTTACCGTTTCTTAA
ACTTGGTTGGAGGTAAGGGAAAGTGCATCTACATCCCGCTGGCAGCTGGC
ATCGATAGCTTGAATGTGGCATCTGCTCTGACGCTGTTGCTTTTTGAACT
GCGCCGAAAACTCATTCATCAGGCATCAGAAAAAGAATAAAAGCTTTCTA
GACCAT

BS29103.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:25:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG14100-RA 1224 CG14100-PA 1..1224 17..1240 6120 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:25:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG14100-RA 1393 CG14100-RA 46..1270 16..1240 6125 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:25:04
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 19589403..19590479 1092..16 5385 100 Minus
3L 28110227 3L 19589195..19589343 1240..1092 745 100 Minus
Blast to na_te.dros performed on 2014-11-28 05:25:05 has no hits.

BS29103.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-25 14:06:49 Download gff for BS29103.complete
Subject Subject Range Query Range Percent Splice Strand
CG14100-RA 38..1248 17..1227 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:38:30 Download gff for BS29103.complete
Subject Subject Range Query Range Percent Splice Strand
CG14100-RA 47..1257 17..1227 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:10:48 Download gff for BS29103.complete
Subject Subject Range Query Range Percent Splice Strand
CG14100-RA 47..1257 17..1227 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:10:48 Download gff for BS29103.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19589208..19589342 1093..1227 100 <- Minus
3L 19589403..19590478 17..1092 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:38:30 Download gff for BS29103.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 19582308..19582442 1093..1227 100 <- Minus
arm_3L 19582503..19583578 17..1092 100   Minus

BS29103.pep Sequence

Translation from 16 to 1239

> BS29103.pep
MLCNIFKRSLQANIRNVNNLNVLRLSSSSGPRGEIQDALDIEANLFGNSD
LRHEPMNTREALRKNRFAGRKPKVPFASVASRNLSAPSNPAPRVAPTPAP
VIKDNELNLEFVRLTLQDPLTSTLLTTVRSRKRRDKNRQIIVEGRRLIQE
ALQCGLKMEVLLFSQKDQLALVKEEVGVAQVETGTKIYKVPQHDLKTWSS
LVTPPGLMAIFDRPSDKGLEKNLAEQQRLGSQPFPITVVCDNIREPNNLG
SIIRTCAALPCSQVVVTHGCCDPWESKALRGGCGGQFRVPIRDDVTWDEL
ALTIPPEAADDCHVFIAETNQRKRENNQTIDYADIKGLGAHNLLIIGGES
HGVSEEAYRFLNLVGGKGKCIYIPLAAGIDSLNVASALTLLLFELRRKLI
HQASEKE*

BS29103.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:19:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG14100-PA 407 CG14100-PA 1..407 1..407 2097 100 Plus