Clone BS29108 Report

Search the DGRC for BS29108

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:291
Well:8
Vector:pDNR-Dual
Associated Gene/TranscriptCG32816-RA
Protein status:BS29108.pep: full length peptide match
Sequenced Size:1169

Clone Sequence Records

BS29108.complete Sequence

1169 bp assembled on 2012-04-25

GenBank Submission: KX801256

> BS29108.complete
GAAGTTATCAGTCGACATGGCATTGTCGAAGAAACTAAGCAGCAAAATCT
ATCGGAGCAGCAGACAAAAAAAAATGTTAACGTTTTGGGAAAAGACATCA
AAAAAATCAGCAGATATACCAAACCAAATCAGCGGAGCACTTGCATCAAG
TAACTTAGCTATCTGCGCCTGTCTAATAGTAATCTTCATTGCATCTGTAA
CCACGGCCAAAACACCGGATCAGGAAGCTATCCATCACAAAAATGACGAA
TTTCCGGAAGAGGAAAGCGACATGGTGATGGAGCCAAATGATTTTTCGCC
AATCACTGTACTAAAGTCACATGAACAACACTTTCATATGCCGCCCACAA
CGCATCTTCAGCCACAAGTTCAAGCTAGAATTCATCCTAGAGTTCAACCC
AGAAAATTTCAATCCGCACTCCAACAAAATGCTGAGGAGCCATTCCGGCC
CATTGCTAATCCAAATACGAAGATTGTTGGCGATTCTCATACGCAGGCTG
CCCAAAATTTCTACCCACCTTTCTACCATGAGGCTCCTCCACTGGGCCAT
TCCAGACCTTACTTTGGTCACGGCCCGCCTGTATCGGAAACAACTCCTTT
ATCCTTACCCCTTCCGCTCTTGACAACTCAACAGCAACAGCCAGCAACTC
AGCAGCGGACTTTCGATGCCAGTATACTTGGAAGTGGGGATTTTGGTGTC
CTTAGAGGTGGAACCTTCTATCCGGAGGAGGAAATGCCCTATCACCCCGA
AGATAACAGTGATTACATCTATGGAGATGCTAACAATGGACACGGTCGAC
CATCTGAGGGTTTTGTTCAAAAGTACACGTATCCAGAGGAGCAGTTCGCT
AATTTTCGCGATTTTGCCGATATCAACACGCCCGCCGATACGGCGTTTTC
GCAATTTGTGGTGGTGTATGCGGCCAAAAATGCCTCTGTACCACACTCTC
ATCCGCATCCTAAAAACATATTTGAACAGTTAGAGCAGCTGGACAGGGAA
AAAGAGCTGAAAAATACCGAATTTGAGAACAAAACTTCTTCGAAAATAAA
GTCGAAATTGTCTAATACAAAGTTGCAAAAAAAATACCGAAAAAAAACGG
CCCCCAAAGTCCAGGATCCTCAAGAAATAGAGCCTTTACTAGCTCTAAGT
TAAAAGCTTTCTAGACCAT

BS29108.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:26:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG32816-RF 1137 CG32816-PF 1..1137 17..1153 5685 100 Plus
CG32816-RE 1137 CG32816-PE 1..1137 17..1153 5685 100 Plus
CG32816-RA 1137 CG32816-PA 1..1137 17..1153 5685 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:26:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG32816-RF 1834 CG32816-RF 253..1389 17..1153 5685 100 Plus
CG32816-RE 1730 CG32816-RE 149..1285 17..1153 5685 100 Plus
CG32816-RA 1821 CG32816-RA 240..1376 17..1153 5685 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:26:23
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 317021..317929 1153..245 4545 100 Minus
X 23542271 X 333565..333793 245..17 1145 100 Minus
Blast to na_te.dros performed on 2014-11-28 05:26:24 has no hits.

BS29108.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-25 14:06:51 Download gff for BS29108.complete
Subject Subject Range Query Range Percent Splice Strand
CG32816-RA 238..1372 17..1151 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:38:37 Download gff for BS29108.complete
Subject Subject Range Query Range Percent Splice Strand
CG32816-RB 224..1358 17..1151 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:11:17 Download gff for BS29108.complete
Subject Subject Range Query Range Percent Splice Strand
CG32816-RA 240..1374 17..1151 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:11:17 Download gff for BS29108.complete
Subject Subject Range Query Range Percent Splice Strand
X 317023..317928 246..1151 100 <- Minus
X 333565..333793 17..245 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:38:37 Download gff for BS29108.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 227598..227826 17..245 100   Minus
arm_X 211056..211961 246..1151 100 <- Minus

BS29108.pep Sequence

Translation from 16 to 1152

> BS29108.pep
MALSKKLSSKIYRSSRQKKMLTFWEKTSKKSADIPNQISGALASSNLAIC
ACLIVIFIASVTTAKTPDQEAIHHKNDEFPEEESDMVMEPNDFSPITVLK
SHEQHFHMPPTTHLQPQVQARIHPRVQPRKFQSALQQNAEEPFRPIANPN
TKIVGDSHTQAAQNFYPPFYHEAPPLGHSRPYFGHGPPVSETTPLSLPLP
LLTTQQQQPATQQRTFDASILGSGDFGVLRGGTFYPEEEMPYHPEDNSDY
IYGDANNGHGRPSEGFVQKYTYPEEQFANFRDFADINTPADTAFSQFVVV
YAAKNASVPHSHPHPKNIFEQLEQLDREKELKNTEFENKTSSKIKSKLSN
TKLQKKYRKKTAPKVQDPQEIEPLLALS*

BS29108.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:19:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG32816-PF 378 CG32816-PF 1..378 1..378 2000 100 Plus
CG32816-PE 378 CG32816-PE 1..378 1..378 2000 100 Plus
CG32816-PA 378 CG32816-PA 1..378 1..378 2000 100 Plus
CG32816-PB 378 CG32816-PB 1..378 1..378 2000 100 Plus
CG32816-PD 293 CG32816-PD 1..293 86..378 1573 100 Plus