BS29109.complete Sequence
968 bp assembled on 2012-04-25
GenBank Submission: KX802591
> BS29109.complete
GAAGTTATCAGTCGACATGTTCATCAAGTTGCTTCTAATTAGCCAGCTGC
TGGCGCTGAGTTACGCTCAGTTGTCGCTCGACGAGGCTAAAAAGCAAATC
GATGCCTCGCTTTACAGCGAAGAGGAGACTACCGATGATACGCATCTGCC
GGAGCCCCACCTGCCCCCCCAATATCAGCCTCATCATCCCCACAAGAAGG
TGACCACCACCACTCCCGAGCCGGAAACCACAACTCCAAAGCCAGAAACC
ACCACGAAGCCCGCAATAGAGCAGGAGGGTGAGGCCACCGCTGCTCCCGA
TGACGGACTGGGTCAACTGGATGATGGCTTGCAACAAAACAATGATGGAT
CTGCGCTTCCAGAGTCCACCACTCCGGAACCGGAAACCACGACCCCTACG
ACGACCACCACCACAACGCCAAAGCCCCATAAGCATGAGCCCCACTTTCA
TCCCCATTCTTATCCGCATCCTCACCCCTATCCCTACCCCATTCAGTATC
CCTACCCCCATCCAGGAGTGATATTCTCTGCCGCGGGACCTAAGCTTACT
CCTCCATCGACCACACCGCCCACTGCCAAAGATGCGGACAAGGAATCGCC
GGAGCTGTCTGGATATCCCTCCTATCCGACCTTCAGATCACCGTACTCGC
CCTACCAACCCCAGGTGTTCCCTCAGCCTCGTAACTGGCCCAGCTTCCCA
GGATACGGACCTCCCAGTCCCGGTTTCGGATACCCCCACAACCACAATCA
CGATCACGAAGAAGACTCCGGCGAAGATAAGCCCAAGGACAAGTCTGGTG
AAAAGGATAAGGACGAGGATGTGGCTCTGAAGCCACCAGGATTTAGCTAC
CCGCAGGTCTATTTGATTCCCCGAAGACCAGTGATCTCTGTGCCCAGCTT
TCCGCGTCCAGGAGGCGGATATGGTTCGCCCTACGGCTACGGACTCTACT
AAAAGCTTTCTAGACCAT
BS29109.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:26:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16772-RB | 936 | CG16772-PB | 1..936 | 17..952 | 4680 | 100 | Plus |
| CG16772-RA | 936 | CG16772-PA | 1..936 | 17..952 | 4680 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:26:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16772-RB | 1030 | CG16772-RB | 47..982 | 17..952 | 4680 | 100 | Plus |
| CG16772-RA | 1095 | CG16772-RA | 47..982 | 17..952 | 4680 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:26:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19962824..19963731 | 45..952 | 4540 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 05:26:32 has no hits.
BS29109.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-25 14:06:51 Download gff for
BS29109.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16772-RA | 53..981 | 22..950 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:38:41 Download gff for
BS29109.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16772-RA | 52..980 | 22..950 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:11:20 Download gff for
BS29109.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16772-RA | 52..980 | 22..950 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:11:20 Download gff for
BS29109.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19962730..19962754 | 22..46 | 100 | -> | Plus |
| 2L | 19962826..19963729 | 47..950 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:38:41 Download gff for
BS29109.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19962730..19962754 | 22..46 | 100 | -> | Plus |
| arm_2L | 19962826..19963729 | 47..950 | 100 | | Plus |
BS29109.pep Sequence
Translation from 16 to 951
> BS29109.pep
MFIKLLLISQLLALSYAQLSLDEAKKQIDASLYSEEETTDDTHLPEPHLP
PQYQPHHPHKKVTTTTPEPETTTPKPETTTKPAIEQEGEATAAPDDGLGQ
LDDGLQQNNDGSALPESTTPEPETTTPTTTTTTTPKPHKHEPHFHPHSYP
HPHPYPYPIQYPYPHPGVIFSAAGPKLTPPSTTPPTAKDADKESPELSGY
PSYPTFRSPYSPYQPQVFPQPRNWPSFPGYGPPSPGFGYPHNHNHDHEED
SGEDKPKDKSGEKDKDEDVALKPPGFSYPQVYLIPRRPVISVPSFPRPGG
GYGSPYGYGLY*
BS29109.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:19:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16772-PB | 311 | CG16772-PB | 1..311 | 1..311 | 1747 | 100 | Plus |
| CG16772-PA | 311 | CG16772-PA | 1..311 | 1..311 | 1747 | 100 | Plus |
| dalao-PA | 749 | CG7055-PA | 401..713 | 45..307 | 160 | 25.2 | Plus |
| CG15021-PA | 420 | CG15021-PA | 44..242 | 94..305 | 157 | 28.6 | Plus |
