Clone BS29113 Report

Search the DGRC for BS29113

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:291
Well:13
Vector:pDNR-Dual
Associated Gene/TranscriptSirt2-RA
Protein status:BS29113.pep: gold
Sequenced Size:1193

Clone Sequence Records

BS29113.complete Sequence

1193 bp assembled on 2012-04-25

GenBank Submission: KX800230

> BS29113.complete
GAAGTTATCAGTCGACATGGGCGACATCGAAGTAAAGAAGGAGGAACAAC
CGACGACGCCCTCCAATTCCTCGTCCAGTGACGACGACGAGGAGGCCCCA
GACGACACAATGGATAAGGTTCGACGCTTCTTTGCAAACACTCTACATCT
CGGCGGCTCCTCGGACGCAAAGGAGGAAGTTAAAGTAGAGAAGGTTATTC
CAGATTTGAGTTTTGACGGCTTTGCCGAACATTGGCGTGTGCATGGTTTC
CGCAAGATTGTGACCATGGTGGGAGCCGGCATATCTACATCTGCTGGCAT
TCCGGATTTCAGATCCCCAGGTTCCGGGTTATACAGCAATCTGAAGAAGT
ACGAGCTGCCACATCCTACGGCCATATTCGATCTGGACTACTTCGAAAAG
AATCCAGCGCCGTTTTTTGCACTGGCCAAGGAACTTTACCCTGGATCCTT
CATTCCCACGCCGGCCCACTACTTTATCCGTTTGCTTAACGACAAGGGAC
TACTGCAGCGCCACTACACCCAGAACATAGACACGCTAGACCGGCTTACT
GGCCTGCCCGAGGACAAGATCATTGAGGCCCATGGCAGCTTCCACACCAA
CCACTGCATTAAGTGCCGCAAGGAGTACGACATGGACTGGATGAAGGCGG
AGATCTTCGCCGATCGTCTGCCCAAATGCCAAAAGTGCCAAGGCGTTGTT
AAACCAGACATTGTTTTCTTTGGCGAAAACTTGCCAAAGAGATTTTACTC
CAGTCCTGAAGAGGATTTCCAGGATTGCGATCTGCTGATCATCATGGGCA
CATCGTTGGAAGTGCAACCGTTTGCTTCACTGGTGTGGAGACCAGGACCA
CGTTGCATTCGCCTCTTGATCAATCGCGATGCAGTGGGTCAGGCCAGCTG
TGTGCTCTTTATGGATCCCAACACGCGATCGCTACTCTTCGATAAGCCCA
ATAACACTAGGGATGTGGCCTTTCTGGGCGACTGTGATGCTGGCGTAATG
GCTCTGGCCAAAGCCTTGGGCTGGGACCAAGAGCTGCAGCAGCTAATTAC
AAGTGAAAGGAAGAAACTGAGCGGCAGCCAGAATAGTGAGGAGCTGCAAC
AAGGCAAAGAGAAACCGCAATCGGACCCGGATAAGATGACTTCGGGCGAT
AGGGACAAGAAGGATGCTTCGCTTTAGAAGCTTTCTAGACCAT

BS29113.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:27:14
Subject Length Description Subject Range Query Range Score Percent Strand
Sirt2-RB 1068 CG5085-PB 1..1068 110..1177 5340 100 Plus
Sirt2-RA 1068 CG5085-PA 1..1068 110..1177 5340 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:27:16
Subject Length Description Subject Range Query Range Score Percent Strand
Sirt2-RB 2285 CG5085-RB 124..1286 16..1178 5815 100 Plus
Sirt2-RA 1399 CG5085-RA 124..1286 16..1178 5815 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:27:12
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 20329029..20329916 291..1178 4440 100 Plus
3R 32079331 3R 20328875..20328973 192..290 495 100 Plus
3R 32079331 3R 20328727..20328822 100..195 480 100 Plus
3R 32079331 3R 20328588..20328673 16..101 430 100 Plus
Blast to na_te.dros performed on 2014-11-28 05:27:13 has no hits.

BS29113.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-25 14:06:53 Download gff for BS29113.complete
Subject Subject Range Query Range Percent Splice Strand
Sirt2-RA 120..1280 17..1177 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:38:51 Download gff for BS29113.complete
Subject Subject Range Query Range Percent Splice Strand
Sirt2-RA 120..1280 17..1177 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:11:36 Download gff for BS29113.complete
Subject Subject Range Query Range Percent Splice Strand
Sirt2-RA 125..1285 17..1177 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:11:36 Download gff for BS29113.complete
Subject Subject Range Query Range Percent Splice Strand
3R 20328589..20328673 17..101 100 -> Plus
3R 20328729..20328820 102..193 100 -> Plus
3R 20328877..20328973 194..290 100 -> Plus
3R 20329029..20329915 291..1177 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:38:51 Download gff for BS29113.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 16154311..16154395 17..101 100 -> Plus
arm_3R 16154451..16154542 102..193 100 -> Plus
arm_3R 16154599..16154695 194..290 100 -> Plus
arm_3R 16154751..16155637 291..1177 100   Plus

BS29113.pep Sequence

Translation from 16 to 1176

> BS29113.pep
MGDIEVKKEEQPTTPSNSSSSDDDEEAPDDTMDKVRRFFANTLHLGGSSD
AKEEVKVEKVIPDLSFDGFAEHWRVHGFRKIVTMVGAGISTSAGIPDFRS
PGSGLYSNLKKYELPHPTAIFDLDYFEKNPAPFFALAKELYPGSFIPTPA
HYFIRLLNDKGLLQRHYTQNIDTLDRLTGLPEDKIIEAHGSFHTNHCIKC
RKEYDMDWMKAEIFADRLPKCQKCQGVVKPDIVFFGENLPKRFYSSPEED
FQDCDLLIIMGTSLEVQPFASLVWRPGPRCIRLLINRDAVGQASCVLFMD
PNTRSLLFDKPNNTRDVAFLGDCDAGVMALAKALGWDQELQQLITSERKK
LSGSQNSEELQQGKEKPQSDPDKMTSGDRDKKDASL*

BS29113.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:20:04
Subject Length Description Subject Range Query Range Score Percent Strand
Sirt2-PB 355 CG5085-PB 1..355 32..386 1892 100 Plus
Sirt2-PA 355 CG5085-PA 1..355 32..386 1892 100 Plus
Sir2-PA 823 CG5216-PA 222..454 79..288 510 43.6 Plus
Sirt6-PB 325 CG6284-PB 47..226 81..272 169 27.7 Plus
Sirt7-PA 771 CG11305-PA 124..306 79..275 157 26.2 Plus