BS29121.complete Sequence
1019 bp assembled on 2012-04-25
GenBank Submission: KX805264
> BS29121.complete
GAAGTTATCAGTCGACATGGAGAAGGTGGAGGCGGTAACAGTGTCCAATG
TTGATCCCTATAGGCGGATCCTAAACAAGGTGGTGTCCCAGCTGCTATTG
GACAAGGGGGCCGGCCAAGCGAGCAACCACAGCCTGGAGACGCTCACCCA
GATGCTGCAGGCGTTGATCTGGGAGATCGGCAATTCGGCGCATAACTACT
GCGAGCTAAGTGGACGCACGATGCCCACCGTGGGCGATGTCAGTTTGGCC
CTGATTAACATGGGCATTTCGATCTCCAATTTGGATCCGTACATGCGCAA
GGAGACGCACGTGCCCATTCCACTGCCCCCACAGCAGACGCAGCAGCGCC
CGCTGAGTCTGCTGCAAGCGGGCATCAAGGCCCCGCATCCCCACTACGTG
CCCAGCTACTTCCCTCCCATGCCCGATCCGCACGCCTACATACGGACGCC
CACGCACAAGCAGCCCGTAACAGAGTACGAGGCCATCAGGGAGAAGGCCG
CCTGCCAGAAGCGGGACATCGAGAAGGCGCTCACAAAGTTCCTCTGCAAG
ACCACGGAGACGAACAACCTCTTTCCCACCGAGGACAACATGTTTCCTTT
AATTGCCTGCAAACCGGCCTTTCCTCCCTATGCAGCCGCTTTAAATCCCA
CAGATCAGGTGTTTGACTTCGAGGAGCTGGAGTACCACTATCTGGTGGCC
AATCGCACAGAAGATGAGCCCAGCAAAGACGACGGCGAAGAGGGCGATAG
CGAAAACGAGGAGATGGATGGCGACAAATCCAAAGAGGAGAAGCCCGAGC
TGGATATCAAGCCCAATTCCAACACAAACAAGGCCATTTTGGAGAACCCC
AACATCGATAATCCCTATTTGCGGGCGGCTACTCTGCCCAAGCGATCCAA
AAATTGCCCCACACCCGGAACCATGCCCAGCAGGAGTCTGGCCACCACGG
CGCCAACGATACGAACGCCCTCCACTCTAGAGATAACCAAAACTAACCTT
TAAAAGCTTTCTAGACCAT
BS29121.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:29:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Taf8-RA | 987 | CG7128-PA | 1..987 | 17..1003 | 4935 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:29:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Taf8-RA | 1341 | CG7128-RA | 90..1077 | 16..1003 | 4940 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:29:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18102268..18102702 | 165..599 | 2175 | 100 | Plus |
| X | 23542271 | X | 18102942..18103218 | 727..1003 | 1385 | 100 | Plus |
| X | 23542271 | X | 18102059..18102207 | 16..164 | 745 | 100 | Plus |
| X | 23542271 | X | 18102758..18102886 | 600..728 | 645 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 05:29:21 has no hits.
BS29121.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-25 14:06:56 Download gff for
BS29121.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Taf8-RA | 89..1073 | 17..1001 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:39:07 Download gff for
BS29121.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Taf8-RA | 91..1075 | 17..1001 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:12:15 Download gff for
BS29121.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Taf8-RA | 91..1075 | 17..1001 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:12:15 Download gff for
BS29121.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18102060..18102207 | 17..164 | 100 | -> | Plus |
| X | 18102268..18102702 | 165..599 | 100 | -> | Plus |
| X | 18102758..18102886 | 600..728 | 100 | -> | Plus |
| X | 18102944..18103216 | 729..1001 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:39:07 Download gff for
BS29121.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 17996093..17996240 | 17..164 | 100 | -> | Plus |
| arm_X | 17996301..17996735 | 165..599 | 100 | -> | Plus |
| arm_X | 17996791..17996919 | 600..728 | 100 | -> | Plus |
| arm_X | 17996977..17997249 | 729..1001 | 100 | | Plus |
BS29121.pep Sequence
Translation from 16 to 1002
> BS29121.pep
MEKVEAVTVSNVDPYRRILNKVVSQLLLDKGAGQASNHSLETLTQMLQAL
IWEIGNSAHNYCELSGRTMPTVGDVSLALINMGISISNLDPYMRKETHVP
IPLPPQQTQQRPLSLLQAGIKAPHPHYVPSYFPPMPDPHAYIRTPTHKQP
VTEYEAIREKAACQKRDIEKALTKFLCKTTETNNLFPTEDNMFPLIACKP
AFPPYAAALNPTDQVFDFEELEYHYLVANRTEDEPSKDDGEEGDSENEEM
DGDKSKEEKPELDIKPNSNTNKAILENPNIDNPYLRAATLPKRSKNCPTP
GTMPSRSLATTAPTIRTPSTLEITKTNL*
BS29121.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:20:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Taf8-PA | 328 | CG7128-PA | 1..328 | 1..328 | 1733 | 100 | Plus |
