BS29137.complete Sequence
1406 bp assembled on 2012-04-25
GenBank Submission: KX804379
> BS29137.complete
GAAGTTATCAGTCGACATGAACTCCACCACAAAGCATCTGCTGCACTGCA
CACTGCTCATCACTGTGATAGTTACCTTCGAAGTATTCTCCGGCGGTATT
AAGATTGACGAGAACTCGTTCACGCTCGTGGATCCTTGGACTGAATACGG
CCAATTGGCCACGGTTCTGCTGTACTTATTGCGCTTTCTCACGCTGCTCA
CGCTGCCCCAGGTGCTGTTCAATTTCTGCGGCCTGGTATTCTACAATGCC
TTCCCCGAGAAGGTCGTCCTCAAGGGCAGCCCCCTGCTGGCGCCCTTCAT
CTGCATCCGTGTGGTCACGCGCGGCGACTTCCCGGATTTGGTTAAGACGA
ATGTGCTGCGCAACATGAACACCTGCCTAGACACGGGACTGGAGAACTTT
CTCATCGAAGTGGTCACGGACAAGGCGGTGAATCTGTCACAGCATCGACG
CATCCGAGAGATCGTTGTGCCCAAGGAGTACAAGACGAGAACCGGGGCGT
TGTTCAAGTCGCGTGCCCTGCAGTATTGCCTGGAGGATAATGTGAACGTG
CTGAACGACAGCGACTGGATCGTCCATCTGGATGAGGAGACGCTGCTCAC
GGAGAATTCGGTGCGTGGTATCATTAACTTTGTGCTGGATGGCAAGCACC
CGTTCGGCCAGGGCCTGATCACCTATGCCAACGAGAACGTGGTCAATTGG
CTGACCACATTGGCGGACAGCTTTCGGGTCTCCGATGATATGGGCAAGCT
GCGTCTGCAGTTCAAGCTCTTTCACAAGCCGCTCTTCAGCTGGAAGGGCA
GTTATGTGGTCACCCAGGTGAGTGCTGAGCGTTCAGTGTCCTTTGACAAC
GGAATCGACGGTTCGGTGGCCGAGGATTGCTTCTTCGCGATGCGGGCCTT
TAGCCAGGGCTACACGTTCAACTTCATCGAGGGCGAAATGTACGAGAAGT
CGCCGTTCACGCTGCTGGACTTCCTGCAGCAGAGGAAACGATGGCTCCAG
GGCATTCTGCTGGTGGTCCACTCCAAGATGATCCCGTTTAAGCACAAGCT
CCTGCTGGGCATCAGTGTCTATTCGTGGGTCACCATGCCGCTGTCCACGT
CGAACATCATCTTTGCGGCACTGTATCCCATTCCCTGCCCAAATCTGGTT
GACTTTGTGTGCGCCTTCATCGCGGCCATTAATATCTACATGTACGTCTT
TGGCGTAATCAAGTCCTTTTCACTGTACCGCTTCGGTTTGTTCCGATTCC
TGGCCTGCGTGCTGGGTGCGGTGTGCACGATACCCGTGAATGTGGTTATC
GAGAATGTGGCTGTCATTTGGGGCCTGGTGGGCAAGAAGCACAAGTTCTA
TGTGGTTCAGAAGGATGTGCGCGTACTGGAGACTGTCTAGAAGCTTTCTA
GACCAT
BS29137.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:30:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| egh-RD | 1374 | CG9659-PD | 1..1374 | 17..1390 | 6870 | 100 | Plus |
| egh-RB | 1374 | CG9659-PB | 1..1374 | 17..1390 | 6870 | 100 | Plus |
| egh-RC | 1374 | CG9659-PC | 1..1374 | 17..1390 | 6870 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:30:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| egh-RD | 2946 | CG9659-RD | 845..2219 | 17..1391 | 6875 | 100 | Plus |
| egh-RB | 3303 | CG9659-RB | 718..2092 | 17..1391 | 6875 | 100 | Plus |
| egh-RC | 3595 | CG9659-RC | 1494..2868 | 17..1391 | 6875 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:30:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2596215..2597021 | 17..823 | 4035 | 100 | Plus |
| X | 23542271 | X | 2597325..2597900 | 816..1391 | 2880 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 05:30:01 has no hits.
BS29137.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-25 14:06:58 Download gff for
BS29137.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| egh-RB | 716..2089 | 17..1390 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:39:19 Download gff for
BS29137.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| egh-RC | 1494..2867 | 17..1390 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:12:31 Download gff for
BS29137.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| egh-RC | 1494..2867 | 17..1390 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:12:31 Download gff for
BS29137.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2596215..2597015 | 17..817 | 100 | -> | Plus |
| X | 2597327..2597899 | 818..1390 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:39:19 Download gff for
BS29137.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2490248..2491048 | 17..817 | 100 | -> | Plus |
| arm_X | 2491360..2491932 | 818..1390 | 100 | | Plus |
BS29137.pep Sequence
Translation from 16 to 1389
> BS29137.pep
MNSTTKHLLHCTLLITVIVTFEVFSGGIKIDENSFTLVDPWTEYGQLATV
LLYLLRFLTLLTLPQVLFNFCGLVFYNAFPEKVVLKGSPLLAPFICIRVV
TRGDFPDLVKTNVLRNMNTCLDTGLENFLIEVVTDKAVNLSQHRRIREIV
VPKEYKTRTGALFKSRALQYCLEDNVNVLNDSDWIVHLDEETLLTENSVR
GIINFVLDGKHPFGQGLITYANENVVNWLTTLADSFRVSDDMGKLRLQFK
LFHKPLFSWKGSYVVTQVSAERSVSFDNGIDGSVAEDCFFAMRAFSQGYT
FNFIEGEMYEKSPFTLLDFLQQRKRWLQGILLVVHSKMIPFKHKLLLGIS
VYSWVTMPLSTSNIIFAALYPIPCPNLVDFVCAFIAAINIYMYVFGVIKS
FSLYRFGLFRFLACVLGAVCTIPVNVVIENVAVIWGLVGKKHKFYVVQKD
VRVLETV*
BS29137.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:20:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| egh-PC | 457 | CG9659-PC | 1..457 | 1..457 | 2378 | 100 | Plus |
| egh-PD | 457 | CG9659-PD | 1..457 | 1..457 | 2378 | 100 | Plus |
| egh-PB | 457 | CG9659-PB | 1..457 | 1..457 | 2378 | 100 | Plus |
