BS29154.complete Sequence
2606 bp assembled on 2012-07-30
GenBank Submission: KX803275
> BS29154.complete
GAAGTTATCAGTCGACATGAGCACACAGAAGGTGGAGTACGACGCTGCGT
TGGGCGGCCGGGTCACACTGCCGTCGCACGTGACCACGTACCATTATGCG
GCCGAGGCGCTGCAGGAGATTCGCAATTTGGTGGCCGACTGCCAGGAGAC
GACGCAGCGGAGCAGCAAGCTAATCTTCCAGACGCTGCCCAAGCACATGC
GCCGCCGCGCCATGTCGCACCATCCCAAGCGACTGCCGCGCAAGTACCGA
CAGGCGCACAAGTCCCAAATGGGCAAAAGCGGCAACCAGCCGGTGAATGG
GAAACGACCATCGAGGAAGTACCGCCGGAGACCCAAGAATCTGATGCGTG
AGTACGTGCGCCGGCAGAGGCGGCACGTCTGGCTGGAGACGCACATCTGG
CACGCGAAGCGATTCCACATGGTTGACCGCTGGGGCCACCGGTTGCCCTA
CGCCAGCTGCGACAAGACCTACCGCGCTTGCTATCGCGCCAGCGCCGAGC
ACTGCCTGCTGCAGGACATCTCGTTCTATGGTTGCGTGGAGTTGCGGGGA
CCCTTGGACATGCTACGCGAGGGATTCGCCCGGCTAACAAGTCCGCAGTG
TGGCCTTGGGATCACGGCCCGGACTTTTCTGAGCGGACGACGTGAGGGCA
GCGTGGAGTTATTTGAGGATGGCCGCTATCCGTATGGAGCCCTGCAGCGG
GCCAGTTTTATGTGGCGGCCACGGCGGGAGGAGGAGGATGAGAAACAGAC
GAATCACACGCTCTGGCTGTGGCTACATCCCAGTGGCGCTCAAGCTGTTC
TAAATCAGCTTATAAGCGTGTTCCAGCTGAAATCCACAAGGCAACAAAAG
CTGCCTTTAAACGAGGCTGTGACTGAGGAAAAGATGGATGTGGATAAGAT
TGAGCCAGTCGAGTTGTCCAAGGAAACATCGCCTGGCAAGAAAAACTCGA
AGAAGAAGCCTGAACAGAGGCCCCTGCGCTTCTGGACAAAAACGAAAGCA
TTCGATCCACAGCCTAGCTACTTCAATTCCGACGGCACTCTCCACTTGGT
ACTGCTGCAGCGGGAGTTTAATCGTTTCCGTTTGACAGGGCCTAGAGCCC
AAAAAGTTCTTTTTGCCAGCTTACGTCCGCATCGAGAAGAGGAGCTCCAG
GATAAAGCCAACTACTGTCAGGCAGCCTTGCAGCTGAGCTCGCCCGCCGA
ACTGCTGTCCAATCTGGTGATGGCCCACCTTGTAGTGGATCCGCGCCTGC
AGCGGCCCAAGAAGCGTACGAAAGCAGTCGGCAAAATGGAACAGCCACCA
TTATCCGCCGGCGATCTTCTCATGAATCAGCCAAAGAGTCTGCCGGAGAG
TCCTCTGTGGAGCAAGAAGGCGAGAGAGCGGCTGGCCAAAGGCATTATGT
CCGCGCACAAGTACGACCAGCTGCGAGAACAACATGCCGTTGTGCCAGGA
GCTCCATGTGCCTTCGAACAGCAAATGCAGGCGCTTCCCGTGATACTTAT
TCAAAGACCAGGATCTCAGGACCCCAGATACAAGAGATTGGGCTACGGCT
GCGGCTGGGATGTGATTGCACCGGCAGGATACGGCATGACCCTCTGGCTA
ACACTCACCATGTGGGGCGCCAGACCCGGCGGATTGAGGGAACTGGATTC
GGTGGCTAGGGAGGCAGGTGCCGAAATACATCTGCCAGATACATTAGCGG
GAGTTCAAAGAGCTGCTGCTTCGGCGGATGAGCTCCGTGCCCGGTATTTC
CGTATGCCGCCCAATAAGCGTACCAATTACCGAAAGTTGGCCGTGGTCAG
TCCGTTTACTGCACCCTGGAGGCATCTAGTGCGCGACTGGCGTGCATCAT
TCAGTTCTGCGAGCGAGGGATCATCGTTCTATGTGCTGCGGCATCGCCAG
CAGCTGGAGGAGATTGTCGAGAGTATTCGACATCGTAGCCCACTGCCACA
GACTCTGCCCGACGACGCCATCATACAGATTCAACTTCAATTGCTATCCC
GTGGCCATGTGAAGGACAACGCCCTGATTTGCTTGCCCACGGCGGCGGAT
CACAAGAAGCGCTGGCGACAGCTAAAGCACAACGACCAGGCCCCCGTTCA
CGTGGAGCCAACGCAACCGGACCTGAATGAACAGTTGCGCAAGGAGCTAC
GCCAGAGTCACAAGCTAAAGCTGAAGCGATTGCGATCGAGAAGGGTGCGT
GAGAAGCGGCGCCTTCAGGAGACTGCCACCAAACGTGTCCACATACGGCC
AGCGAATACGGCTCATCTCGTACGTGGCCAACTACAGGAGATGTGCCGCC
TGTGGCTGCCCACCGATCCGGCGGAGCTGCGGGACAGTGTGCGTCGCCAG
TGTAGTCGCCAAGTGTTTGGCTACGTGAGCACGGCCGGCTTCAGCTTCAC
GGAGGCACTCGTCTGTGCAGTGGGCTATGTGACACCCGCCGGCCTGCAGC
AGCTCATCGAGGAGCTCCCAGCATCTAAGGGCAACCGCAAACAGCCGCCG
CTAATGTGCCTGGTGCGCGATGCGGATAGCCGCGACTATCGCTGGGCCAG
CTTTCAGGTCAACCTGAATGTGGCTAGTCCAACCTTTTGAAAGCTTTCTA
GACCAT
BS29154.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:55:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(1)G0045-RA | 2574 | CG32763-PA | 1..2574 | 17..2590 | 12870 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:55:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(1)G0045-RA | 2779 | CG32763-RA | 77..2650 | 17..2590 | 12870 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:55:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5622724..5624408 | 17..1701 | 8425 | 100 | Plus |
| X | 23542271 | X | 5624474..5625364 | 1700..2590 | 4455 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:55:48 has no hits.
BS29154.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-30 10:23:08 Download gff for
BS29154.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(1)G0045-RA | 375..2947 | 17..2589 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:35:14 Download gff for
BS29154.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(1)G0045-RA | 77..2649 | 17..2589 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:53:45 Download gff for
BS29154.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(1)G0045-RA | 77..2649 | 17..2589 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:53:45 Download gff for
BS29154.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5622724..5624407 | 17..1700 | 100 | -> | Plus |
| X | 5624475..5625363 | 1701..2589 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:35:14 Download gff for
BS29154.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5516757..5518440 | 17..1700 | 100 | -> | Plus |
| arm_X | 5518508..5519396 | 1701..2589 | 100 | | Plus |
BS29154.pep Sequence
Translation from 16 to 2589
> BS29154.pep
MSTQKVEYDAALGGRVTLPSHVTTYHYAAEALQEIRNLVADCQETTQRSS
KLIFQTLPKHMRRRAMSHHPKRLPRKYRQAHKSQMGKSGNQPVNGKRPSR
KYRRRPKNLMREYVRRQRRHVWLETHIWHAKRFHMVDRWGHRLPYASCDK
TYRACYRASAEHCLLQDISFYGCVELRGPLDMLREGFARLTSPQCGLGIT
ARTFLSGRREGSVELFEDGRYPYGALQRASFMWRPRREEEDEKQTNHTLW
LWLHPSGAQAVLNQLISVFQLKSTRQQKLPLNEAVTEEKMDVDKIEPVEL
SKETSPGKKNSKKKPEQRPLRFWTKTKAFDPQPSYFNSDGTLHLVLLQRE
FNRFRLTGPRAQKVLFASLRPHREEELQDKANYCQAALQLSSPAELLSNL
VMAHLVVDPRLQRPKKRTKAVGKMEQPPLSAGDLLMNQPKSLPESPLWSK
KARERLAKGIMSAHKYDQLREQHAVVPGAPCAFEQQMQALPVILIQRPGS
QDPRYKRLGYGCGWDVIAPAGYGMTLWLTLTMWGARPGGLRELDSVAREA
GAEIHLPDTLAGVQRAAASADELRARYFRMPPNKRTNYRKLAVVSPFTAP
WRHLVRDWRASFSSASEGSSFYVLRHRQQLEEIVESIRHRSPLPQTLPDD
AIIQIQLQLLSRGHVKDNALICLPTAADHKKRWRQLKHNDQAPVHVEPTQ
PDLNEQLRKELRQSHKLKLKRLRSRRVREKRRLQETATKRVHIRPANTAH
LVRGQLQEMCRLWLPTDPAELRDSVRRQCSRQVFGYVSTAGFSFTEALVC
AVGYVTPAGLQQLIEELPASKGNRKQPPLMCLVRDADSRDYRWASFQVNL
NVASPTF*
BS29154.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:17:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(1)G0045-PA | 857 | CG32763-PA | 1..857 | 1..857 | 4524 | 100 | Plus |
