BS29155.complete Sequence
1832 bp assembled on 2012-05-15
GenBank Submission: KX802966
> BS29155.complete
GAAGTTATCAGTCGACATGTCACCCAAGGACGGCAGCCTGGGCGATGCTA
AATTCGCCAAGTATACGGTGAACCATGAGCCGCCACCTCCTTCGGCGATG
ACGACGACACAGTCCACCAACAGTGGTGTGGATAAACCGATAGCTAAGGA
AAAGGACAATGGCACAACGAATCCGCCCGTGAAACGATCCTGGCGCGAGA
AGATCCGCCTGGTGGCCAACAATGTCACCGTGGAACCGATCCTGGCCGCC
TACATCATGCCCAGCGTGCTCTCCAATCTGGCCACCCAGAATCTTAACCT
GGAGAAGGCCTGTCGAGTGAACATGGCCTACGGGGATGAGGTGTGCGATG
CACTCACCCGCCGCCAAACAGCCAACTACACACTAGAGGAGGAAACAGTG
CAGCAAATGGTGGCGCGAATGGCCGCCTGGAAGACGGTGATCCAGTCCCT
GTTCCCCTGCCTGCTGATCCTTTTCTGGGGATCCTGGAGCGATCGCCATC
GCCGGCGGAAGCCCTGCATCCTCATCCCGGTGGTGGGCGAGTTCCTGGGG
GTGGTGGGCCTGATGCTGTGCGTCTACTTCGAACAGGCGCCCATGGAGGC
AGCCGCCCTCACGGAAGCCATCTTCCCCTCCCTCAGCGGCGGCTGGTTCA
CCATGCTGATGGGCGTCTTCAGCTACATTGCGGACATCACCACGGAGGAG
GATCGCACGCTGAGGATCGGCATTCTCAATGTCTGCTTCTCGGTGGGCGT
GCCGATCGGAATGGCCTTCAGTGGAGTGCTGCTCAAGCAAATTGGATTCT
ACGGCGTATTCTCGATCTCCGCCGCCTTCTACGTGATAGCCTTCGTTTAC
GGCTTCTTTTTCCTGGAGGAGCCACAATCTCGGCCGGAGAAAAGTGCGGA
GCAAAAGAGCCTGCTGGCCGACTTTTTCGACAAGGAGCACGTGGTGCAGA
CATTCCGGGTGGCCTTCAAGAAGGGCGAAAATCAGCGCCGCAAACGCGTG
ATCCTGCTGATGATCGTGGTGATGGTCATCATTGGTCCACTGCACGGCGA
GATGGCAGTCACGTATCTATTCACGCGATTCCGGTTCAATTGGTCGGAAG
TGGAGTTTAGTTTCTTCTCGACTTATGCCATGTTTACGGGTCTCATCGGT
GTGATTTTCTGCGTGGGCATTCTCTCCCACAAGCTGAACATCGATGATGC
ACTGGTCGGCGTTTTGTCCAGCACCTCGAAGATCCTATCGTCCTTTGTCT
ACGCTTTTGCCACACTGCCATGGCATATGTACCTGGGCGGACTGGTGGAG
ATCTTCAATGGCACGGCGTTTATAGCGATGCGTTCGATAGCCACCAAGTT
GGTGTCCAAGGACGAACTGGGCAAGGTGAACTCACTGTTCGGAGTGGCAG
AGGCCCTAATGCCCATGGTGTTTGCGCCCATGTACACGACCTTGTATGCC
GCTACATTGAGAGTCCTGCCAGGTGCCTTCTTCCTGCTCGGCGGTGGTCT
TACCCTGTTCTCTGTCTTCATATTCCTATGGATGTACCGATTCCAGGTTC
GCCAGCGGCGAAATCTGGCCTCCGCGGATGCTGAAAGTGCCGCCGTGAAG
GATCCCAATGGCAATATCAATGCTATCGAAGCGTTGGTCCTGGCCAGCGA
GGCCAAGGGTCAGATGAACGGGATCATCGCCAATGTGATACACGAGTCCT
TGGAGCACGCAGATCCTATATCGACACCACCCACAAACACCGCACAACAA
ATCGAACGGGGCATCGAGAACCATGGGTTCGTTCAGGAGGAGAAGGTCAA
GGATCGGGATTGTTAGAAGCTTTCTAGACCAT
BS29155.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:58:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15890-RB | 1800 | CG15890-PB | 1..1800 | 17..1816 | 8985 | 99.9 | Plus |
| CG15890-RA | 1800 | CG15890-PA | 1..1800 | 17..1816 | 8985 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:58:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15890-RB | 2702 | CG15890-RB | 387..2186 | 17..1816 | 8985 | 99.9 | Plus |
| CG15890-RA | 2705 | CG15890-RA | 390..2189 | 17..1816 | 8985 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:58:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 14758397..14759137 | 1527..787 | 3690 | 99.9 | Minus |
| X | 23542271 | X | 14759244..14759646 | 787..385 | 2015 | 100 | Minus |
| X | 23542271 | X | 14759998..14760365 | 384..17 | 1840 | 100 | Minus |
| X | 23542271 | X | 14758047..14758335 | 1816..1528 | 1445 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 12:58:16 has no hits.
BS29155.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-15 10:35:55 Download gff for
BS29155.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15890-RA | 390..2189 | 17..1816 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:49:26 Download gff for
BS29155.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15890-RA | 390..2189 | 17..1816 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:18:15 Download gff for
BS29155.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15890-RA | 390..2189 | 17..1816 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:18:15 Download gff for
BS29155.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 14758047..14758335 | 1528..1816 | 100 | <- | Minus |
| X | 14758397..14759137 | 787..1527 | 99 | <- | Minus |
| X | 14759245..14759646 | 385..786 | 100 | <- | Minus |
| X | 14759998..14760365 | 17..384 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:49:26 Download gff for
BS29155.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 14652080..14652368 | 1528..1816 | 100 | <- | Minus |
| arm_X | 14652430..14653170 | 787..1527 | 99 | <- | Minus |
| arm_X | 14653278..14653679 | 385..786 | 100 | <- | Minus |
| arm_X | 14654031..14654398 | 17..384 | 100 | | Minus |
BS29155.pep Sequence
Translation from 16 to 1815
> BS29155.pep
MSPKDGSLGDAKFAKYTVNHEPPPPSAMTTTQSTNSGVDKPIAKEKDNGT
TNPPVKRSWREKIRLVANNVTVEPILAAYIMPSVLSNLATQNLNLEKACR
VNMAYGDEVCDALTRRQTANYTLEEETVQQMVARMAAWKTVIQSLFPCLL
ILFWGSWSDRHRRRKPCILIPVVGEFLGVVGLMLCVYFEQAPMEAAALTE
AIFPSLSGGWFTMLMGVFSYIADITTEEDRTLRIGILNVCFSVGVPIGMA
FSGVLLKQIGFYGVFSISAAFYVIAFVYGFFFLEEPQSRPEKSAEQKSLL
ADFFDKEHVVQTFRVAFKKGENQRRKRVILLMIVVMVIIGPLHGEMAVTY
LFTRFRFNWSEVEFSFFSTYAMFTGLIGVIFCVGILSHKLNIDDALVGVL
SSTSKILSSFVYAFATLPWHMYLGGLVEIFNGTAFIAMRSIATKLVSKDE
LGKVNSLFGVAEALMPMVFAPMYTTLYAATLRVLPGAFFLLGGGLTLFSV
FIFLWMYRFQVRQRRNLASADAESAAVKDPNGNINAIEALVLASEAKGQM
NGIIANVIHESLEHADPISTPPTNTAQQIERGIENHGFVQEEKVKDRDC*
BS29155.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:29:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15890-PB | 599 | CG15890-PB | 1..599 | 1..599 | 3075 | 100 | Plus |
| CG15890-PA | 599 | CG15890-PA | 1..599 | 1..599 | 3075 | 100 | Plus |
| CG31321-PB | 601 | CG31321-PB | 15..585 | 48..535 | 605 | 28.3 | Plus |
| CG42514-PC | 531 | CG32158-PD | 21..490 | 31..504 | 420 | 23.3 | Plus |
| CG42514-PB | 533 | CG32158-PE | 23..492 | 31..504 | 420 | 23.3 | Plus |
