BS29186.complete Sequence
2330 bp assembled on 2012-06-11
GenBank Submission: KX803791
> BS29186.complete
GAAGTTATCAGTCGACATGTCATTGCAGTTGTTAAAAGCGCTACCCCACC
TGCGCAGCGCCACCACAGCCGTGAGAACTCAGATTGCAAGAACAACGTGG
AGCGAGCACATTGCCACGAAAGTGTTTTTTAGCACCACTACCACAAAACC
TACTCCCTCCGCACCACCACCACCTCCACCAACGCAACCGCAGCAGCCAG
CTGCAACCACAAGTTGGGGCACCAAGAAGCAAAATAGAAAGGTAAAACTA
AGATCCGCCGCTGCCGAGTTCATCATGTCGAATCCCGAGATTGAGGCTCA
ACTTGCCCCATTGAGGGAACGAGTTCAGGAGCAGGGTAACCTGGTGAGGG
ATCTCAAGGCGAAGGGTGCCCCCGAGATCGATGTGAAAAAGGCAGTAGCC
GAGCTGAAGGCACGCAAGAAGCTGCTGGAGGACAAAGAGCTCGCCCTGAC
CCCCAGTGTCGTTAGTTTCGATCGCGCGAAGATGGAGGATCTACTCAAGC
GTCGCTTCTTCTACGACCAGAGTTTCGCAATTTATGGCGGCATCACCGGC
CAGTACGATTTTGGACCCATGGGCTGTGCCCTCAAGTCCAACATTCTGGC
CCTATGGCGTCAGTATTTCGCCCTCGAAGAGCAAATGCTGGAGGTGGACT
GCTCTATTCTGACTCCCGAACCTGTGCTCAAAGCCTCTGGTCACGTGGAG
CGTTTCGCTGATCTGATGGTCAAGGATGTCAAGACCGGCGAGTGCTTCCG
CCTGGATCATCTCATTAAGCAGGCTTTGGAAAAGCTATCTAAGGCCAAGG
ATGCAACTCCCGCCCTGCAGGCCGAGTGTGAGGATATTATCATTAAACTG
GATGGCCTGAACAAACAGGAATTGGCTGGTGTCCTGGCCAAATACAACAT
CAAATCTCCATTAACCGGCAATGATTTAACAGAACCGATTGAGTTCAACC
TGATGTTTGCCACCCAAATTGGACCCACTGGCTTGGTCAAGGGATTCCTG
CGGCCCGAAACTGCCCAGGGTATCTTCGTCAACTTCAAGCGACTGCTGGA
ATTCAATCAAGGCAAGCTTCCCTTCGCTGTGGCTCAAATTGGCAACTCCT
TCCGCAATGAAATCTCACCCCGATCGGGATTGATCCGTGTGCGAGAGTTC
ACCATGGCAGAGATTGAACATTTCTGTGATCCCGTGCTCAAGGACCATCC
CAAATTTGGCAACATCAAATCGGAAAAGTTGACCCTTTACTCGGCGTGCA
ACCAGATGGATGGAAAGTCTGCCGCTCAGGTGCAAATCGGCGAAGCAGTG
GCATCCAAACTGGTGGCTAATGAGACACTTGGTTACTATATGGCCCGCAT
TCAGCAGTTCCTGTTGGCCATTGGTATCAAACCGGAGTGCTTGCGATTCC
GGCAGCACATGTCCAATGAGATGGCTCACTATGCATGCGATTGCTGGGAT
GCCGAAATTCTTACCTCCTACGGATGGGTGGAGTGCGTAGGATGTGCGGA
TCGCAGTGCCTACGATTTGGGACAGCATACGGCCGCCACAGGTGTGCGTT
TGGTGGCCGAGAAGCGTCTGCCGGCTCCCAAAACGGTCGAGGTCAGCGAG
ATTGTGCCAAACAAGCAGGCTCTCGGAAAGACCTTCAAGAAGGAGGCAAA
GAACATCACGGATGCGTTGGCTAAGCTTTCGCTGGAGGAGATAACCAAGG
TAGAGGAACAGCTGGCTGGCGATGGTCAATACAAACTGACCACGGCCGAT
GGCCAAAGCCACGATCTCGGAAAGGACACCATCAGCGTTAAGCACTCTAC
GAAAACGGTCCATGTGGAGGAGTTCATCCCGAGTGTGGTTGAGCCTTCAT
TCGGCATTGGTCGCATCATGTACTCCCTGTTGGAGCACAGTTTCCAATGC
CGCGACGGCGACGAGCAGCGGTGCTACTTTACGCTACCGCCTCTGGTGGC
GCCCATCAAGTGCTCCATCCTTCCGCTGTCCAACAACACCGACTTTCAAC
CTTATACTCAGAAACTGTCTTCTGCCCTGACCAAGGCGGAACTTTCGCAC
AAGGTGGACGACTCCAGTGGATCCATTGGCAGGCGGTATGCCCGCACGGA
TGAGATTGCCATACCCTATGGCATCACCGTGGACTTCGACACTCTAAAGG
AACCGCATACGGTGACTCTGCGAGATCGGAATACTATGAAACAGGTGCGC
GTCGGTCTGGAGGAGGTTGTGGGCGTCGTCAAGGACTTGTCGACGGCGAG
AACCACCTGGGAGAGTGTCACCGAACAGTATCCTCTGTTCGAACAGCAGG
AGGCCAGCAAGTAAAAGCTTTCTAGACCAT
BS29186.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:34:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-gly-RC | 2298 | CG6778-PC | 1..2298 | 17..2314 | 11475 | 100 | Plus |
| Aats-gly-RB | 2298 | CG6778-PB | 1..2298 | 17..2314 | 11475 | 100 | Plus |
| Aats-gly-RA | 2040 | CG6778-PA | 1..2040 | 275..2314 | 10185 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:34:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-gly-RC | 2476 | CG6778-RC | 52..2349 | 17..2314 | 11475 | 100 | Plus |
| Aats-gly-RB | 2545 | CG6778-RB | 121..2418 | 17..2314 | 11475 | 100 | Plus |
| Aats-gly-RA | 2457 | CG6778-RA | 43..2330 | 27..2314 | 11425 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:34:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15095262..15097559 | 17..2314 | 11475 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:34:04 has no hits.
BS29186.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-11 09:14:56 Download gff for
BS29186.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-gly-RB | 81..2376 | 17..2312 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:27:07 Download gff for
BS29186.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-gly-RB | 121..2416 | 17..2312 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:46:51 Download gff for
BS29186.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-gly-RB | 121..2416 | 17..2312 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:46:51 Download gff for
BS29186.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15095262..15097557 | 17..2312 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:27:07 Download gff for
BS29186.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15088362..15090657 | 17..2312 | 99 | | Plus |
BS29186.pep Sequence
Translation from 16 to 2313
> BS29186.pep
MSLQLLKALPHLRSATTAVRTQIARTTWSEHIATKVFFSTTTTKPTPSAP
PPPPPTQPQQPAATTSWGTKKQNRKVKLRSAAAEFIMSNPEIEAQLAPLR
ERVQEQGNLVRDLKAKGAPEIDVKKAVAELKARKKLLEDKELALTPSVVS
FDRAKMEDLLKRRFFYDQSFAIYGGITGQYDFGPMGCALKSNILALWRQY
FALEEQMLEVDCSILTPEPVLKASGHVERFADLMVKDVKTGECFRLDHLI
KQALEKLSKAKDATPALQAECEDIIIKLDGLNKQELAGVLAKYNIKSPLT
GNDLTEPIEFNLMFATQIGPTGLVKGFLRPETAQGIFVNFKRLLEFNQGK
LPFAVAQIGNSFRNEISPRSGLIRVREFTMAEIEHFCDPVLKDHPKFGNI
KSEKLTLYSACNQMDGKSAAQVQIGEAVASKLVANETLGYYMARIQQFLL
AIGIKPECLRFRQHMSNEMAHYACDCWDAEILTSYGWVECVGCADRSAYD
LGQHTAATGVRLVAEKRLPAPKTVEVSEIVPNKQALGKTFKKEAKNITDA
LAKLSLEEITKVEEQLAGDGQYKLTTADGQSHDLGKDTISVKHSTKTVHV
EEFIPSVVEPSFGIGRIMYSLLEHSFQCRDGDEQRCYFTLPPLVAPIKCS
ILPLSNNTDFQPYTQKLSSALTKAELSHKVDDSSGSIGRRYARTDEIAIP
YGITVDFDTLKEPHTVTLRDRNTMKQVRVGLEEVVGVVKDLSTARTTWES
VTEQYPLFEQQEASK*
BS29186.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:03:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-gly-PC | 765 | CG6778-PC | 1..765 | 1..765 | 3935 | 100 | Plus |
| Aats-gly-PB | 765 | CG6778-PB | 1..765 | 1..765 | 3935 | 100 | Plus |
| Aats-gly-PA | 679 | CG6778-PA | 1..679 | 87..765 | 3490 | 100 | Plus |
