BS29210.complete Sequence
548 bp assembled on 2012-04-25
GenBank Submission: KX802265
> BS29210.complete
GAAGTTATCAGTCGACATGTACCAGCTGGAGAAGATCTGGGTCCTGCTGT
GCCTGGCCCTCGTCGGTGTCCTTGGCTTCGGCCAGTTCCACATGAAGCAC
TATCAGCTGCAGCGTAACTACAATACGCAGGAGGATTCCGGCGAGAATGA
CAATAGTGTGCTGCGAACCTTTCGCCGCTGCATGTGGGAGCAGTCGAAGT
TTCTGCCCCGCCGCCTCGTCCTTTTGAGCCTGTGCTCGAATCTCTTCTGC
GAGAACAATCACATAATGCCCCGTTCCAGCTGCCTGGACATCCTGCCCGA
GCAATGCGAGCAGGGCGATGAGGAGGAGCTGATGTACAAGCCCTTCCCCG
ACTGCTGTCCGGTTTATTGCAACCTGAAGCGTCGGATGCAGCGCCTGCGC
ACCATGCACTTCCGGCACCGCCTGCTGCGCAACAAACAGGACGGCTCAGC
GGGATCCGCTGGCGGTGGATCCGCTGGTGGCGACGGTCCCAATAACTCGC
TCCTCAGTGAGTTTGTCTACAACAACTACTAGAAGCTTTCTAGACCAT
BS29210.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 07:40:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1552-RB | 516 | CG1552-PB | 1..516 | 17..532 | 2580 | 100 | Plus |
| CG1552-RC | 555 | CG1552-PC | 1..263 | 17..279 | 1315 | 100 | Plus |
| CG1552-RA | 555 | CG1552-PA | 1..263 | 17..279 | 1315 | 100 | Plus |
| CG1552-RC | 555 | CG1552-PC | 303..555 | 280..532 | 1265 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 07:40:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1552-RB | 798 | CG1552-RB | 28..547 | 13..532 | 2585 | 99.8 | Plus |
| CG1552-RC | 1060 | CG1552-RC | 68..334 | 13..279 | 1320 | 99.6 | Plus |
| CG1552-RA | 837 | CG1552-RA | 28..294 | 13..279 | 1320 | 99.6 | Plus |
| CG1552-RC | 1060 | CG1552-RC | 374..626 | 280..532 | 1265 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 07:40:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11052605..11052862 | 532..275 | 1290 | 100 | Minus |
| X | 23542271 | X | 11053337..11053489 | 165..13 | 750 | 99.3 | Minus |
| X | 23542271 | X | 11053073..11053187 | 279..165 | 575 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 07:40:18 has no hits.
BS29210.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-25 14:07:25 Download gff for
BS29210.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1552-RB | 32..547 | 17..532 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:41:20 Download gff for
BS29210.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1552-RB | 32..547 | 17..532 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:01:25 Download gff for
BS29210.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1552-RB | 32..547 | 17..532 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:01:25 Download gff for
BS29210.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11052605..11052857 | 280..532 | 100 | <- | Minus |
| X | 11053073..11053187 | 165..279 | 100 | <- | Minus |
| X | 11053338..11053485 | 17..164 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:41:20 Download gff for
BS29210.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10947106..10947220 | 165..279 | 100 | <- | Minus |
| arm_X | 10947371..10947518 | 17..164 | 100 | | Minus |
| arm_X | 10946638..10946890 | 280..532 | 100 | <- | Minus |
BS29210.pep Sequence
Translation from 16 to 531
> BS29210.pep
MYQLEKIWVLLCLALVGVLGFGQFHMKHYQLQRNYNTQEDSGENDNSVLR
TFRRCMWEQSKFLPRRLVLLSLCSNLFCENNHIMPRSSCLDILPEQCEQG
DEEELMYKPFPDCCPVYCNLKRRMQRLRTMHFRHRLLRNKQDGSAGSAGG
GSAGGDGPNNSLLSEFVYNNY*
BS29210.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:22:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1552-PB | 171 | CG1552-PB | 1..171 | 1..171 | 938 | 100 | Plus |
| CG1552-PC | 184 | CG1552-PC | 1..184 | 1..171 | 910 | 92.4 | Plus |
| CG1552-PA | 184 | CG1552-PA | 1..184 | 1..171 | 910 | 92.4 | Plus |
