Clone BS29269 Report

Search the DGRC for BS29269

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:292
Well:69
Vector:pDNR-Dual
Associated Gene/TranscriptCG33275-RC
Protein status:BS29269.pep: full length peptide match
Sequenced Size:2651

Clone Sequence Records

BS29269.complete Sequence

2651 bp assembled on 2012-07-30

GenBank Submission: KX800698

> BS29269.complete
GAAGTTATCAGTCGACATGACACCCGGGCCAAAAACAGAAGAGCCCGGTG
CCGGTAAATTGGCAGCCGAAATAGCCAACTATGTCACCTCATGGATGGGC
AGCGATGGAGCAGAGAATTTGCAAAAGTTTTCTCAGCTGCACTGGGACAA
CGAGTCGCAGTTGAGGACTCAGGAACAGGAGTTTGAAAAGTACTACTTCA
TAGCCATGAAACACTTGGCCAAAGGACGCGACTTGCATGCTGCTGCCCTT
AAAGTTTCTGTCCTAAGTGAAAGCGCCAATAATCTAAAGTCCGCCCTGGA
TCAATTCGCCCAGAAACTGGAGCTGGCCCACGAACGCTATGATGCTGCCG
GGCGTCTGCTGCACTTGCTCACCCAGCATCAGCGGGAAAACGCCGCCAGG
GAGGAACTGCAGCGTTTGGCTGAGCAACTGGGCGCCACCTCGCTGCTGGA
GAAGCACTGGCCGGTGATGCGGAAGACCCATACGTTGCCAGTGGCCAGTA
GCACACCGGCTGCAGCTGCTGGAAAACGGGTTAGCTATCGCTGCAGCTCG
GCCAGTAGGAGTTCCTTTGAGGGAGGTCCATCGAGCAGCAATTGCAGTTG
CTGGCGGGAAAGTCGCAACCTGGAGGACATGGATCAAATGGAAGAGGAGG
AAGAGGAGCAGGATCACGATTGCGACGGTGGTGATGGAGAGGAACAACAG
TCCAAGATCGCCGATTCTGGTTTGGGCGTTTGCGACAATTGCGAACGTAA
TCCCAAGCTGGCCAGGATTTGCTCCTGCCAAAGCCTTAACGAAAAGAGTC
ACGATGAGCTGCTCGAGGACGAGTGCTTCGATCGACCCTCTAAGAGATAC
ATGGACATCATGCACTCGCCCATGGAGGCGAATGCCCATCTGCAGTGCCA
TGGCTCCAGTCTAGAGCTGCCCAAGCTGGAGGAGCTCAGCTGCCTGGATC
CCAAGATACAAAAAACGCTTCTATTGATCATGCGTGAGATGATTGGTACC
GAACGCGACTATGTCCGCTCCCTGTACTACGTGATCGAGAACTATATAGA
TGAACTGCTTCGCGAGGATATCCCTCAGCCACTGAGGGGCCAGAGAAATG
TGATCTTCGGTAATATCGAGAAGATCTTCGAATTCCATAACTCGCACTTC
CTGGGCGAACTGGAACGCTACGAGAGGAATCCATTAAAAGTGGGAGCTGC
CTTTCTGGAGATGGAGTCCAAATTCTACCTATATGCGCTTTACAACAAGA
ATAAACCCAAAAGCGATACTTTACTAAGCGAATATGGTAGCTCATTTTTC
AAGCCCAAGCAAATGCAGCTTCAGGATAAGCTAGATCTAGCCTCTTACCT
CCTGAAACCCGTGCAGAGAATGGGAAAATATGCATTGCTCCTGCAGCAGT
TGGTCAAAGCCTGCAAAGGTGTGGAAGGAGCAGCTCTACAGGAAATCGCA
GCGGATGTAGAAGAGCTGCAGCGAGCAGAAGAAATGGTCAAGTTTCAGCT
ACGCCATGGAAATGATCTGCTGGCCATGGACTCCTTGCGCGATTGCGATG
TGAATGTCAAGGAGCAGGGACGACTACTGCGCCAAAATGAATTCCTCGTT
TGGCAAGGACGCGGTGGCAAGAAAACTCTGCGACAAGTGTTTCTCTTCGA
AGAACTGGTGCTCTTCAGCAAAGCTCGTCGCTTTCCCGATCATAAGAATC
TGGATATCTACATCTACAAGAACAGCATTAAAACTTCAGATATCGGCCTC
ACAGCGCACACAGGTGATTCGGCTACCAAGTTCGAGATTTGGTTCCGGAA
ACGAAAGCCCGATGATACGTGGATGCTACAGTGCATGTCGGAGGACATTA
AGAACGCCTGGACCGAGGAGATCTCCAAACTGCTCTGGAAGCAGGCGAAA
CGAAACCGAGAAGTTCGCCTGGCGGAGATGTCCTCAATGGGCATTGGCAG
CAAGCCCTGTCTAGATATTCGACCCAGCAACAACCAGATCAGCGATCGCT
CGATTCCCTTGGCACAGCTAAACAAGACTCCCAAACTGCGACACTCTGAG
CCTGGAAAGGGCAGCATGCGGCGTCCCAATTCACTGATATCAGAGAGCTC
CTTGTCCAGCGGCACCAGCACTACCAGTGGCTCCTCCATCAGCGGTGGCT
CCTCCTCGGGTCACAATGATGGCGGTGGCAGGCACAGCCTGCACTTTGGC
AAGCTGCCTGGAGCACACAGCGCAAGTTCCACCAACTGCAGTGCCACTTT
GGAGCTGATCAACGAAACTCAGGCCCTGAAGTTGGCCAAATCCCCGAGTG
GAGGTGGAATCAAGGGGGCGGATACGGCCGCCGACGGAGGCAACACTTCC
GGAAACGGAAATGGCAACGGAAACGCATTCAGGAGCAGCAAACGAAACCA
CAAACGATCGACGACCATTGTCAGCCAACTGTCCATGGAGAGCGGCATTG
TCTCGGACATGTGCGTTACCCCGGATCAGGAACAATCGGCGGCGGAGAGC
AGCCGAAGCAGTTGGTCCACATCAACGACTGGAGCATCCGGAGCTTCAAC
GACGAGTGCATCCACGGTAATCCTGCGGCGATATCGATCCTACGCCCACG
CAGCGGAGTCCGCCAGTCCGGAAAGCGGCAAATAGAAGCTTTCTAGACCA
T

BS29269.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:56:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG33275-RC 2619 CG33275-PC 1..2619 17..2635 13080 100 Plus
CG33275-RD 5697 CG33275-PD 3145..5697 83..2635 12750 100 Plus
CG33275-RB 4287 CG33275-PB 1735..4287 83..2635 12750 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:56:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG33275-RC 3253 CG33275-RC 98..2718 16..2636 13090 100 Plus
CG33275-RD 6257 CG33275-RD 3169..5722 83..2636 12755 100 Plus
CG33275-RB 5584 CG33275-RB 2496..5049 83..2636 12755 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:56:05
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 7636748..7637480 964..1696 3650 99.9 Plus
3L 28110227 3L 7635873..7636463 208..798 2955 100 Plus
3L 28110227 3L 7638157..7638567 2028..2438 2055 100 Plus
3L 28110227 3L 7637686..7637901 1695..1910 1080 100 Plus
3L 28110227 3L 7638840..7639038 2438..2636 995 100 Plus
3L 28110227 3L 7636524..7636690 797..963 835 100 Plus
3L 28110227 3L 7635681..7635806 83..208 630 100 Plus
3L 28110227 3L 7637957..7638075 1909..2027 595 100 Plus
3L 28110227 3L 7633546..7633614 16..84 345 100 Plus
Blast to na_te.dros performed on 2014-11-28 11:56:06 has no hits.

BS29269.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-30 10:23:10 Download gff for BS29269.complete
Subject Subject Range Query Range Percent Splice Strand
CG33275-RC 70..2682 17..2629 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:35:20 Download gff for BS29269.complete
Subject Subject Range Query Range Percent Splice Strand
CG33275-RC 99..2711 17..2629 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:53:52 Download gff for BS29269.complete
Subject Subject Range Query Range Percent Splice Strand
CG33275-RC 99..2711 17..2629 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:53:52 Download gff for BS29269.complete
Subject Subject Range Query Range Percent Splice Strand
3L 7633547..7633612 17..82 100 -> Plus
3L 7635681..7635806 83..208 100 -> Plus
3L 7635874..7636463 209..798 100 -> Plus
3L 7636526..7636690 799..963 100 -> Plus
3L 7636748..7637480 964..1696 99 -> Plus
3L 7637688..7637901 1697..1910 100 -> Plus
3L 7637959..7638075 1911..2027 100 -> Plus
3L 7638157..7638567 2028..2438 100 -> Plus
3L 7638841..7639031 2439..2629 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:35:20 Download gff for BS29269.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 7626647..7626712 17..82 100 -> Plus
arm_3L 7628781..7628906 83..208 100 -> Plus
arm_3L 7628974..7629563 209..798 100 -> Plus
arm_3L 7629626..7629790 799..963 100 -> Plus
arm_3L 7629848..7630580 964..1696 99 -> Plus
arm_3L 7630788..7631001 1697..1910 100 -> Plus
arm_3L 7631059..7631175 1911..2027 100 -> Plus
arm_3L 7631257..7631667 2028..2438 100 -> Plus
arm_3L 7631941..7632131 2439..2629 100   Plus

BS29269.pep Sequence

Translation from 16 to 2634

> BS29269.pep
MTPGPKTEEPGAGKLAAEIANYVTSWMGSDGAENLQKFSQLHWDNESQLR
TQEQEFEKYYFIAMKHLAKGRDLHAAALKVSVLSESANNLKSALDQFAQK
LELAHERYDAAGRLLHLLTQHQRENAAREELQRLAEQLGATSLLEKHWPV
MRKTHTLPVASSTPAAAAGKRVSYRCSSASRSSFEGGPSSSNCSCWRESR
NLEDMDQMEEEEEEQDHDCDGGDGEEQQSKIADSGLGVCDNCERNPKLAR
ICSCQSLNEKSHDELLEDECFDRPSKRYMDIMHSPMEANAHLQCHGSSLE
LPKLEELSCLDPKIQKTLLLIMREMIGTERDYVRSLYYVIENYIDELLRE
DIPQPLRGQRNVIFGNIEKIFEFHNSHFLGELERYERNPLKVGAAFLEME
SKFYLYALYNKNKPKSDTLLSEYGSSFFKPKQMQLQDKLDLASYLLKPVQ
RMGKYALLLQQLVKACKGVEGAALQEIAADVEELQRAEEMVKFQLRHGND
LLAMDSLRDCDVNVKEQGRLLRQNEFLVWQGRGGKKTLRQVFLFEELVLF
SKARRFPDHKNLDIYIYKNSIKTSDIGLTAHTGDSATKFEIWFRKRKPDD
TWMLQCMSEDIKNAWTEEISKLLWKQAKRNREVRLAEMSSMGIGSKPCLD
IRPSNNQISDRSIPLAQLNKTPKLRHSEPGKGSMRRPNSLISESSLSSGT
STTSGSSISGGSSSGHNDGGGRHSLHFGKLPGAHSASSTNCSATLELINE
TQALKLAKSPSGGGIKGADTAADGGNTSGNGNGNGNAFRSSKRNHKRSTT
IVSQLSMESGIVSDMCVTPDQEQSAAESSRSSWSTSTTGASGASTTSAST
VILRRYRSYAHAAESASPESGK*

BS29269.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:18:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG33275-PC 872 CG33275-PC 1..872 1..872 4516 100 Plus
CG33275-PD 1898 CG33275-PD 1049..1898 23..872 4400 100 Plus
CG33275-PB 1428 CG33275-PB 579..1428 23..872 4400 100 Plus
CG33275-PA 1904 CG33275-PA 1055..1904 23..872 4400 100 Plus
trio-PC 2263 CG18214-PC 1287..1728 321..780 458 29.6 Plus