Clone BS29303 Report

Search the DGRC for BS29303

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:293
Well:3
Vector:pDNR-Dual
Associated Gene/TranscriptCG7045-RA
Protein status:BS29303.pep: gold
Sequenced Size:413

Clone Sequence Records

BS29303.complete Sequence

413 bp assembled on 2012-05-03

GenBank Submission: KX803805

> BS29303.complete
GAAGTTATCAGTCGACATGTCAGACTGCGGAGCGCGCCCCAAAAAACCCA
TGAGCGCCTTCATGTTGTGGATGAATTCCACCGGGCGGAAGCACATAAAA
GCGGAGCATCCCGATTTTAGTGTCCAAGAAGTGTCTGTGAAGGGCGGAGA
GATGTGGCGAGCCATGGCCGATGAGGACAAGATCGTGTGGCAGGAGTCGG
CCACCACGGCAATGGCCGAGTACAAGGAGAAGTTGAAGCAGTGGAATTTC
CCCAAGGAGCACCGCTTTTCGGACACGCAATGTATTTGTTCCTCAAATAC
TAACCAATGCCCCACCCTTTTTGTGTACGACACCATGGATGACTCGATGA
CTCCGATCTGCAGGAAGTGCTTATCAAAGACCAGGTGCCTTCACTAAAAG
CTTTCTAGACCAT

BS29303.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:52:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG7045-RA 381 CG7045-PA 1..381 17..397 1905 100 Plus
CG7046-RB 405 CG7046-PB 4..250 17..263 1010 93.9 Plus
CG7046-RA 402 CG7046-PA 1..247 17..263 1010 93.9 Plus
CG7046-RB 405 CG7046-PB 300..405 292..397 305 85.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:52:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG7045-RA 553 CG7045-RA 99..479 17..397 1905 100 Plus
CG7046-RB 550 CG7046-RB 67..313 17..263 1010 93.9 Plus
CG7046-RA 588 CG7046-RA 105..351 17..263 1010 93.9 Plus
CG7046-RB 550 CG7046-RB 363..469 292..398 310 86 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:52:18
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 22491927..22492307 17..397 1905 100 Plus
3R 32079331 3R 22493263..22493509 17..263 1010 93.9 Plus
3R 32079331 3R 22493559..22493665 292..398 310 86 Plus
Blast to na_te.dros performed on 2014-11-28 12:52:19 has no hits.

BS29303.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-03 11:00:20 Download gff for BS29303.complete
Subject Subject Range Query Range Percent Splice Strand
CG7045-RA 99..477 17..395 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:47:22 Download gff for BS29303.complete
Subject Subject Range Query Range Percent Splice Strand
CG7045-RA 99..477 17..395 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:15:40 Download gff for BS29303.complete
Subject Subject Range Query Range Percent Splice Strand
CG7045-RA 99..477 17..395 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:15:40 Download gff for BS29303.complete
Subject Subject Range Query Range Percent Splice Strand
3R 22491927..22492305 17..395 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:47:22 Download gff for BS29303.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 18317649..18318027 17..395 100   Plus

BS29303.pep Sequence

Translation from 16 to 396

> BS29303.pep
MSDCGARPKKPMSAFMLWMNSTGRKHIKAEHPDFSVQEVSVKGGEMWRAM
ADEDKIVWQESATTAMAEYKEKLKQWNFPKEHRFSDTQCICSSNTNQCPT
LFVYDTMDDSMTPICRKCLSKTRCLH*

BS29303.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:28:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG7045-PA 126 CG7045-PA 1..126 1..126 698 100 Plus
CG7046-PA 133 CG7046-PA 1..133 1..126 491 71.4 Plus
CG7046-PB 134 CG7046-PB 2..134 1..126 491 71.4 Plus
HmgD-PD 112 CG17950-PD 1..70 1..76 166 46.1 Plus
HmgD-PC 112 CG17950-PC 1..70 1..76 166 46.1 Plus