BS29303.complete Sequence
413 bp assembled on 2012-05-03
GenBank Submission: KX803805
> BS29303.complete
GAAGTTATCAGTCGACATGTCAGACTGCGGAGCGCGCCCCAAAAAACCCA
TGAGCGCCTTCATGTTGTGGATGAATTCCACCGGGCGGAAGCACATAAAA
GCGGAGCATCCCGATTTTAGTGTCCAAGAAGTGTCTGTGAAGGGCGGAGA
GATGTGGCGAGCCATGGCCGATGAGGACAAGATCGTGTGGCAGGAGTCGG
CCACCACGGCAATGGCCGAGTACAAGGAGAAGTTGAAGCAGTGGAATTTC
CCCAAGGAGCACCGCTTTTCGGACACGCAATGTATTTGTTCCTCAAATAC
TAACCAATGCCCCACCCTTTTTGTGTACGACACCATGGATGACTCGATGA
CTCCGATCTGCAGGAAGTGCTTATCAAAGACCAGGTGCCTTCACTAAAAG
CTTTCTAGACCAT
BS29303.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:52:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7045-RA | 381 | CG7045-PA | 1..381 | 17..397 | 1905 | 100 | Plus |
CG7046-RB | 405 | CG7046-PB | 4..250 | 17..263 | 1010 | 93.9 | Plus |
CG7046-RA | 402 | CG7046-PA | 1..247 | 17..263 | 1010 | 93.9 | Plus |
CG7046-RB | 405 | CG7046-PB | 300..405 | 292..397 | 305 | 85.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:52:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7045-RA | 553 | CG7045-RA | 99..479 | 17..397 | 1905 | 100 | Plus |
CG7046-RB | 550 | CG7046-RB | 67..313 | 17..263 | 1010 | 93.9 | Plus |
CG7046-RA | 588 | CG7046-RA | 105..351 | 17..263 | 1010 | 93.9 | Plus |
CG7046-RB | 550 | CG7046-RB | 363..469 | 292..398 | 310 | 86 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:52:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 22491927..22492307 | 17..397 | 1905 | 100 | Plus |
3R | 32079331 | 3R | 22493263..22493509 | 17..263 | 1010 | 93.9 | Plus |
3R | 32079331 | 3R | 22493559..22493665 | 292..398 | 310 | 86 | Plus |
Blast to na_te.dros performed on 2014-11-28 12:52:19 has no hits.
BS29303.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-03 11:00:20 Download gff for
BS29303.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7045-RA | 99..477 | 17..395 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:47:22 Download gff for
BS29303.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7045-RA | 99..477 | 17..395 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:15:40 Download gff for
BS29303.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7045-RA | 99..477 | 17..395 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:15:40 Download gff for
BS29303.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 22491927..22492305 | 17..395 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:47:22 Download gff for
BS29303.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 18317649..18318027 | 17..395 | 100 | | Plus |
BS29303.pep Sequence
Translation from 16 to 396
> BS29303.pep
MSDCGARPKKPMSAFMLWMNSTGRKHIKAEHPDFSVQEVSVKGGEMWRAM
ADEDKIVWQESATTAMAEYKEKLKQWNFPKEHRFSDTQCICSSNTNQCPT
LFVYDTMDDSMTPICRKCLSKTRCLH*
BS29303.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:28:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7045-PA | 126 | CG7045-PA | 1..126 | 1..126 | 698 | 100 | Plus |
CG7046-PA | 133 | CG7046-PA | 1..133 | 1..126 | 491 | 71.4 | Plus |
CG7046-PB | 134 | CG7046-PB | 2..134 | 1..126 | 491 | 71.4 | Plus |
HmgD-PD | 112 | CG17950-PD | 1..70 | 1..76 | 166 | 46.1 | Plus |
HmgD-PC | 112 | CG17950-PC | 1..70 | 1..76 | 166 | 46.1 | Plus |