BS29311.complete Sequence
485 bp assembled on 2012-05-07
GenBank Submission: KX804722
> BS29311.complete
GAAGTTATCAGTCGACATGGCGGTCTCATCGTCCTCGTCGTCGTTTTCCA
ACTACTTGATGGCGGTATTTGCCCAGGATAGCAATAGTAGTGGCAGTGCC
AGCGGAAGTGGAGCAGCCGCCGACTCGGAGGACTCCCAGATTGGCCAGGA
GGCCAATCCAGGTGGCCAGGAGAATCAGGGAAATCACAGGAGGCGACCGC
CGCGCCAGAAGATCAATGCTAGAGAGCGCTATCGGACATTTAATGTTAAT
TCGGCCTACGAGGCATTAAGAAATTTAATACCCACGGAGCCCATGAATCG
CAAGCTTTCAAAGATCGAGATCATCCGCCTGGCCAGCAGCTATATAACGC
ACCTAAGTAGCACCCTAGAAACAGGCACTGAATGCCAGCCATGTTTGCTG
CACAAATACGAGAGCGAAGGAATAACTAGACGTATCAGTATCTGCACCTT
TTGCCTGAAAACCAAATAAAAGCTTTCTAGACCAT
BS29311.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:55:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33557-RA | 453 | CG33557-PA | 1..451 | 17..467 | 2255 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:55:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33557-RA | 674 | CG33557-RA | 26..480 | 17..471 | 2260 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:55:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 10009235..10009461 | 17..243 | 1135 | 100 | Plus |
| X | 23542271 | X | 10009571..10009702 | 244..375 | 660 | 100 | Plus |
| X | 23542271 | X | 10009757..10009855 | 373..471 | 480 | 99 | Plus |
Blast to na_te.dros performed on 2014-11-28 12:55:20 has no hits.
BS29311.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-07 11:48:37 Download gff for
BS29311.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33557-RA | 1..451 | 17..467 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:48:12 Download gff for
BS29311.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33557-RA | 26..476 | 17..467 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:16:52 Download gff for
BS29311.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33557-RA | 26..476 | 17..467 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:16:52 Download gff for
BS29311.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 10009235..10009461 | 17..243 | 100 | -> | Plus |
| X | 10009571..10009701 | 244..374 | 100 | -> | Plus |
| X | 10009759..10009851 | 375..467 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:48:12 Download gff for
BS29311.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 9903268..9903494 | 17..243 | 100 | -> | Plus |
| arm_X | 9903604..9903734 | 244..374 | 100 | -> | Plus |
| arm_X | 9903792..9903884 | 375..467 | 100 | | Plus |
BS29311.pep Sequence
Translation from 16 to 468
> BS29311.pep
MAVSSSSSSFSNYLMAVFAQDSNSSGSASGSGAAADSEDSQIGQEANPGG
QENQGNHRRRPPRQKINARERYRTFNVNSAYEALRNLIPTEPMNRKLSKI
EIIRLASSYITHLSSTLETGTECQPCLLHKYESEGITRRISICTFCLKTK
*
BS29311.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:28:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33557-PA | 150 | CG33557-PA | 1..150 | 1..150 | 765 | 100 | Plus |
| Fer1-PA | 251 | CG33323-PA | 23..157 | 2..134 | 153 | 30.9 | Plus |
| Fer1-PB | 256 | CG33323-PB | 23..162 | 2..134 | 148 | 31 | Plus |
