Clone BS29407 Report

Search the DGRC for BS29407

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:294
Well:7
Vector:pDNR-Dual
Associated Gene/TranscriptCG8119-RA
Protein status:BS29407.pep: gold
Sequenced Size:767

Clone Sequence Records

BS29407.complete Sequence

767 bp assembled on 2012-05-03

GenBank Submission: KX800977

> BS29407.complete
GAAGTTATCAGTCGACATGACTTCTGCCGATAACAAGTATCCGACCAACA
ATCTGGAGACAAACCACCTACTCCGCGAGATTGCACTTCGTCCATCGATC
TGGGACAGTCGCATCAAATTCTCGCTGCGTCGGCCGCAAATCCCTATCGA
CTGGCTGGATGTCTCCAATGCGGTAGGACTTGGCGTTGACGAGTGCAAGC
GGCGTTGGAAGAGTCTGCGTAACAACTACCGCACTAAGATCCACCAAGGA
AACGCCTGGAGCTGGCCGCACTCCAAACAAATGGAGTTCGTTCGCGATGT
CTTCCCGCCACACAAGCCCAAGACTCCTGCGCGTTGCCGTGTTCAGGTGA
AGAAAAGCAAGCTAATTCTACATCCGCAACAATATCTGCAATCGGTGGCG
AGCTATTCGGCATTCAAAAAGGGTGGCATCGAATTCGAGGCGGAGGAGAG
ACTCTTTCTGGTTACGGACGAGCCGGCATTCGATCTGGATGTGGACGAGG
AGGTGACCAGGCTATTGGGCACCGATCAATGGTTGTGGCAAACCAATCTG
GACTTCATACTACTGCCCATTTTTCGAGCGCCACCGCCATCAGCCATGGC
CAAAATATCCAACGAATCGAACCGCCATTTCCTGCTCAGCATGGTGCCCA
TGCTCCGATCTTTGAGCGATCGCAGCAAGGAACGTTTCCGCAGTTGGACA
CGGCGAGTGCTAAGGGAGATGCTCATCGCGGAGAAGAAGCTGCTGACGTA
AAAGCTTTCTAGACCAT

BS29407.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:53:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG8119-RA 735 CG8119-PA 1..733 17..749 3650 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:53:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG8119-RA 735 CG8119-RA 1..733 17..749 3650 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:53:07
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15662585..15663317 17..749 3650 99.9 Plus
Blast to na_te.dros performed on 2014-11-28 12:53:08 has no hits.

BS29407.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-03 11:00:25 Download gff for BS29407.complete
Subject Subject Range Query Range Percent Splice Strand
CG8119-RA 1..733 17..749 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:47:41 Download gff for BS29407.complete
Subject Subject Range Query Range Percent Splice Strand
CG8119-RA 1..733 17..749 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:16:03 Download gff for BS29407.complete
Subject Subject Range Query Range Percent Splice Strand
CG8119-RA 1..733 17..749 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:16:03 Download gff for BS29407.complete
Subject Subject Range Query Range Percent Splice Strand
X 15662585..15663317 17..749 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:47:41 Download gff for BS29407.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 15556618..15557350 17..749 99   Plus

BS29407.pep Sequence

Translation from 16 to 750

> BS29407.pep
MTSADNKYPTNNLETNHLLREIALRPSIWDSRIKFSLRRPQIPIDWLDVS
NAVGLGVDECKRRWKSLRNNYRTKIHQGNAWSWPHSKQMEFVRDVFPPHK
PKTPARCRVQVKKSKLILHPQQYLQSVASYSAFKKGGIEFEAEERLFLVT
DEPAFDLDVDEEVTRLLGTDQWLWQTNLDFILLPIFRAPPPSAMAKISNE
SNRHFLLSMVPMLRSLSDRSKERFRSWTRRVLREMLIAEKKLLT*

BS29407.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:28:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG8119-PA 244 CG8119-PA 1..244 1..244 1289 100 Plus