Clone BS29512 Report

Search the DGRC for BS29512

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:295
Well:12
Vector:pDNR-Dual
Associated Gene/TranscriptCG15201-RA
Protein status:BS29512.pep: full length peptide match
Sequenced Size:374

Clone Sequence Records

BS29512.complete Sequence

374 bp assembled on 2012-05-25

GenBank Submission: KX803099

> BS29512.complete
GAAGTTATCAGTCGACATGCACAACCGTTGCGGATCCATTTGGCTGCTGG
CGGCCGTCCTGCTGCTGCTGGCGCTCCTGCTTCCGCAGGCACTGCTGCCT
ACCGTCGATGCGGCCAGCGAACCCGTGTGCTCCTACCGCAACTCGGAGGA
TGAGACCATCTTTCTCAAGTATCTGCCGCTGCTGAGACGCGGACAGGACT
ACGTGGACTTCGGCAAGGATGGCAAGTGCCTCAAGCGGGCCATCTGCACG
GACACCTTCAAGACCATCGTGGAGGACTGTGGACAGCAGAAGGTCACCTG
CGGCAACAAGGATCGCTTCACCGGAGTTTTCCCTGCCTGCTGCCTCAAGT
GTCCCTAAAAGCTTTCTAGACCAT

BS29512.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:28:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG15201-RA 342 CG15201-PA 1..342 17..358 1710 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:28:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG15201-RA 489 CG15201-RA 34..376 17..359 1715 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:28:33
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11144319..11144482 113..276 820 100 Plus
X 23542271 X 11144153..11144249 17..113 485 100 Plus
X 23542271 X 11144614..11144696 277..359 415 100 Plus
Blast to na_te.dros performed 2014-11-28 11:28:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1530..1602 97..28 114 65.8 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2325..2394 97..27 109 63.4 Minus
roo 9092 roo DM_ROO 9092bp 1064..1129 88..25 109 65.2 Minus
roo 9092 roo DM_ROO 9092bp 1057..1168 148..38 107 57.5 Minus

BS29512.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-25 09:30:06 Download gff for BS29512.complete
Subject Subject Range Query Range Percent Splice Strand
CG15201-RA 34..373 17..356 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:15 Download gff for BS29512.complete
Subject Subject Range Query Range Percent Splice Strand
CG15201-RA 34..373 17..356 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:44:20 Download gff for BS29512.complete
Subject Subject Range Query Range Percent Splice Strand
CG15201-RA 34..373 17..356 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:44:20 Download gff for BS29512.complete
Subject Subject Range Query Range Percent Splice Strand
X 11144614..11144693 277..356 100   Plus
X 11144153..11144249 17..113 100 -> Plus
X 11144320..11144482 114..276 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:15 Download gff for BS29512.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 11038647..11038726 277..356 100   Plus
arm_X 11038186..11038282 17..113 100 -> Plus
arm_X 11038353..11038515 114..276 100 -> Plus

BS29512.pep Sequence

Translation from 16 to 357

> BS29512.pep
MHNRCGSIWLLAAVLLLLALLLPQALLPTVDAASEPVCSYRNSEDETIFL
KYLPLLRRGQDYVDFGKDGKCLKRAICTDTFKTIVEDCGQQKVTCGNKDR
FTGVFPACCLKCP*

BS29512.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:59:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG15201-PA 113 CG15201-PA 1..113 1..113 611 100 Plus