BS29512.complete Sequence
374 bp assembled on 2012-05-25
GenBank Submission: KX803099
> BS29512.complete
GAAGTTATCAGTCGACATGCACAACCGTTGCGGATCCATTTGGCTGCTGG
CGGCCGTCCTGCTGCTGCTGGCGCTCCTGCTTCCGCAGGCACTGCTGCCT
ACCGTCGATGCGGCCAGCGAACCCGTGTGCTCCTACCGCAACTCGGAGGA
TGAGACCATCTTTCTCAAGTATCTGCCGCTGCTGAGACGCGGACAGGACT
ACGTGGACTTCGGCAAGGATGGCAAGTGCCTCAAGCGGGCCATCTGCACG
GACACCTTCAAGACCATCGTGGAGGACTGTGGACAGCAGAAGGTCACCTG
CGGCAACAAGGATCGCTTCACCGGAGTTTTCCCTGCCTGCTGCCTCAAGT
GTCCCTAAAAGCTTTCTAGACCAT
BS29512.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:28:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15201-RA | 342 | CG15201-PA | 1..342 | 17..358 | 1710 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:28:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15201-RA | 489 | CG15201-RA | 34..376 | 17..359 | 1715 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:28:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 11144319..11144482 | 113..276 | 820 | 100 | Plus |
X | 23542271 | X | 11144153..11144249 | 17..113 | 485 | 100 | Plus |
X | 23542271 | X | 11144614..11144696 | 277..359 | 415 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 11:28:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1530..1602 | 97..28 | 114 | 65.8 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2325..2394 | 97..27 | 109 | 63.4 | Minus |
roo | 9092 | roo DM_ROO 9092bp | 1064..1129 | 88..25 | 109 | 65.2 | Minus |
roo | 9092 | roo DM_ROO 9092bp | 1057..1168 | 148..38 | 107 | 57.5 | Minus |
BS29512.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-25 09:30:06 Download gff for
BS29512.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15201-RA | 34..373 | 17..356 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:15 Download gff for
BS29512.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15201-RA | 34..373 | 17..356 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:44:20 Download gff for
BS29512.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15201-RA | 34..373 | 17..356 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:44:20 Download gff for
BS29512.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 11144614..11144693 | 277..356 | 100 | | Plus |
X | 11144153..11144249 | 17..113 | 100 | -> | Plus |
X | 11144320..11144482 | 114..276 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:15 Download gff for
BS29512.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11038647..11038726 | 277..356 | 100 | | Plus |
arm_X | 11038186..11038282 | 17..113 | 100 | -> | Plus |
arm_X | 11038353..11038515 | 114..276 | 100 | -> | Plus |
BS29512.pep Sequence
Translation from 16 to 357
> BS29512.pep
MHNRCGSIWLLAAVLLLLALLLPQALLPTVDAASEPVCSYRNSEDETIFL
KYLPLLRRGQDYVDFGKDGKCLKRAICTDTFKTIVEDCGQQKVTCGNKDR
FTGVFPACCLKCP*
BS29512.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:59:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15201-PA | 113 | CG15201-PA | 1..113 | 1..113 | 611 | 100 | Plus |