Clone BS29525 Report

Search the DGRC for BS29525

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:295
Well:25
Vector:pDNR-Dual
Associated Gene/TranscriptDiedel-RA
Protein status:BS29525.pep: full length peptide match
Sequenced Size:380

Clone Sequence Records

BS29525.complete Sequence

380 bp assembled on 2012-05-25

GenBank Submission: KX805122

> BS29525.complete
GAAGTTATCAGTCGACATGGCATCCCCAGTAGTCAGCCTGCTTCTCGTCG
GGATCTGCGCCCTGGCCTTTGTCCATGTGGCTCGGTCGGAATGCTGCACC
TCCCGGGAGCTGGTGGAATTCAAGATGGACAGAGGCGACTGCGAGGCTGT
GCGTGCAATCGAAAACTATCCCAACGGCTGCGAAGTGACGATCTGCGCCG
ATGGTGTTGCCCAGTTGGGCGCCTACTGCGGCCAGGGATCGTGCAACATC
TTCGGCTGCAACTGCGACGGCGGCTGTCTGAGCGGCGATTGGTCACAGGA
ATTTGTGAGGAGGAACCAGCAGTACGGAATCCAGATCATCAAAGTCACCA
GGCTGCCATTTTAAAAGCTTTCTAGACCAT

BS29525.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:29:12
Subject Length Description Subject Range Query Range Score Percent Strand
Diedel-RA 348 CG11501-PA 1..348 17..364 1740 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:29:12
Subject Length Description Subject Range Query Range Score Percent Strand
Diedel-RA 416 CG11501-RA 27..375 16..364 1745 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:29:10
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29493878..29494226 16..364 1745 100 Plus
Blast to na_te.dros performed on 2014-11-28 11:29:11 has no hits.

BS29525.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-25 09:30:14 Download gff for BS29525.complete
Subject Subject Range Query Range Percent Splice Strand
CG11501-RA 28..373 17..362 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:36 Download gff for BS29525.complete
Subject Subject Range Query Range Percent Splice Strand
Diedel-RA 28..373 17..362 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:44:41 Download gff for BS29525.complete
Subject Subject Range Query Range Percent Splice Strand
Diedel-RA 28..373 17..362 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:44:41 Download gff for BS29525.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29493879..29494224 17..362 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:36 Download gff for BS29525.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25319601..25319946 17..362 100   Plus

BS29525.pep Sequence

Translation from 16 to 363

> BS29525.pep
MASPVVSLLLVGICALAFVHVARSECCTSRELVEFKMDRGDCEAVRAIEN
YPNGCEVTICADGVAQLGAYCGQGSCNIFGCNCDGGCLSGDWSQEFVRRN
QQYGIQIIKVTRLPF*

BS29525.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:00:12
Subject Length Description Subject Range Query Range Score Percent Strand
Diedel-PA 115 CG11501-PA 1..115 1..115 625 100 Plus
Diedel2-PA 125 CG43228-PA 4..106 9..112 228 39.4 Plus
Diedel3-PB 121 CG34329-PB 1..107 1..108 225 40.7 Plus
Diedel3-PA 121 CG34329-PA 1..107 1..108 225 40.7 Plus