Clone BS29529 Report

Search the DGRC for BS29529

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:295
Well:29
Vector:pDNR-Dual
Associated Gene/TranscriptCG17107-RA
Protein status:BS29529.pep: full length peptide match
Sequenced Size:323

Clone Sequence Records

BS29529.complete Sequence

323 bp assembled on 2012-05-25

GenBank Submission: KX801685

> BS29529.complete
GAAGTTATCAGTCGACATGAAGTTCCTGGCTATCTGCATTTTTCTAATCT
TCGCCCTGGTGGCCGTTCAGGCACATCCTGGTGGATTCGGCGGATTCGGT
GGAGGCGGTGGTGGCGGTGGTCGCGGTGGAGGCGGTGGAGGCGGTGGAGT
CGGTGGAGTCGGCGGTTCGAACGCAGTTGCCAACGCGAATGCCGCTGCAA
CCGCCGACAGCAGAGGAGGCGGCCCAGCTTCCGCCTCGGCCTCGGCCACT
GCAACCGCCAACGCCAGCTCCGGAGGAGGTGGAGGTGGACATGGCAGACA
TGGATAGAAGCTTTCTAGACCAT

BS29529.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:29:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG17107-RC 291 CG17107-PC 1..291 17..307 1455 100 Plus
CG17107-RB 291 CG17107-PB 1..291 17..307 1455 100 Plus
CG17107-RA 291 CG17107-PA 1..291 17..307 1455 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:29:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG17107-RC 563 CG17107-RC 26..316 17..307 1455 100 Plus
CG17107-RB 482 CG17107-RB 90..380 17..307 1455 100 Plus
CG17107-RA 418 CG17107-RA 26..316 17..307 1455 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:29:13
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10681991..10682281 17..307 1455 100 Plus
Blast to na_te.dros performed on 2014-11-28 11:29:14 has no hits.

BS29529.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-25 09:30:15 Download gff for BS29529.complete
Subject Subject Range Query Range Percent Splice Strand
CG17107-RA 17..307 17..307 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:38 Download gff for BS29529.complete
Subject Subject Range Query Range Percent Splice Strand
CG17107-RA 26..316 17..307 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:44:43 Download gff for BS29529.complete
Subject Subject Range Query Range Percent Splice Strand
CG17107-RA 26..316 17..307 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:44:43 Download gff for BS29529.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10681991..10682281 17..307 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:38 Download gff for BS29529.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10681991..10682281 17..307 100   Plus

BS29529.pep Sequence

Translation from 16 to 306

> BS29529.pep
MKFLAICIFLIFALVAVQAHPGGFGGFGGGGGGGGRGGGGGGGGVGGVGG
SNAVANANAAATADSRGGGPASASASATATANASSGGGGGGHGRHG*

BS29529.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:00:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG17107-PC 96 CG17107-PC 1..96 1..96 506 100 Plus
CG17107-PB 96 CG17107-PB 1..96 1..96 506 100 Plus
CG17107-PA 96 CG17107-PA 1..96 1..96 506 100 Plus
CG17105-PB 103 CG17105-PB 1..99 1..91 175 43.4 Plus
CG17105-PA 103 CG17105-PA 1..99 1..91 175 43.4 Plus