BS29530.complete Sequence
548 bp assembled on 2012-05-25
GenBank Submission: KX800899
> BS29530.complete
GAAGTTATCAGTCGACATGTATGCACTCTCCAGTTCTTTGATCCGCTCTC
CGGCGCTGCGCCAGGGCCTCCAGATGGCCGCTGCCAGCCGCCCGGTATCG
ATGAAGGTGGTTTCCGTGGCCGAAACCCAGAAGGACGAGTCGTTCTTCGA
GAAGAACGAGCGCTTGGGCAGGGAGCTGTCGCCCCATCTGACCATCTACC
AACCGCAGCTGACCTCCATGCTCTCGATCTGTCACCGCGGCACAGGATTG
GCCCTGGGTGTGGGTGTTTGGGGTCTGGGATTGGGCGCTCTGATCTCGTC
CCACGACATTAGCCACTATGTGACCATGGTGGAGGGCCTCCAGCTGAGTG
GCGCCACTCTGACCGCCCTCAAGTTTATCATCGCCTATCCGGCTGGCTAT
CACACCGCCAATGGTATTAGGCATCTCCTCTGGGACACCGGACGGTTCCT
GAAGATCAAGGAGGTTTACTCCACCGGTTACGCAATGGTCGCCACCTCTT
TCGTGCTATCCGCTATCTTGGCCCTGCTCTAAAAGCTTTCTAGACCAT
BS29530.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:29:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| SdhC-RB | 516 | CG6666-PB | 1..516 | 17..532 | 2580 | 100 | Plus |
| SdhC-RA | 516 | CG6666-PA | 1..516 | 17..532 | 2580 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:29:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| SdhC-RB | 906 | CG6666-RB | 51..566 | 17..532 | 2580 | 100 | Plus |
| SdhC-RA | 656 | CG6666-RA | 51..566 | 17..532 | 2580 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:29:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11209227..11209740 | 532..19 | 2570 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 11:29:17 has no hits.
BS29530.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-25 09:30:16 Download gff for
BS29530.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| SdhC-RA | 51..564 | 17..530 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:40 Download gff for
BS29530.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| SdhC-RA | 51..564 | 17..530 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:44:44 Download gff for
BS29530.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| SdhC-RA | 51..564 | 17..530 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:44:44 Download gff for
BS29530.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11209229..11209742 | 17..530 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:40 Download gff for
BS29530.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7034951..7035464 | 17..530 | 99 | | Minus |
BS29530.pep Sequence
Translation from 16 to 531
> BS29530.pep
MYALSSSLIRSPALRQGLQMAAASRPVSMKVVSVAETQKDESFFEKNERL
GRELSPHLTIYQPQLTSMLSICHRGTGLALGVGVWGLGLGALISSHDISH
YVTMVEGLQLSGATLTALKFIIAYPAGYHTANGIRHLLWDTGRFLKIKEV
YSTGYAMVATSFVLSAILALL*
BS29530.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:00:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| SdhC-PB | 171 | CG6666-PB | 1..171 | 1..171 | 857 | 100 | Plus |
| SdhC-PA | 171 | CG6666-PA | 1..171 | 1..171 | 857 | 100 | Plus |
| CG6629-PA | 261 | CG6629-PA | 59..199 | 26..168 | 265 | 41.3 | Plus |
