BS29531.complete Sequence
302 bp assembled on 2012-05-25
GenBank Submission: KX801798
> BS29531.complete
GAAGTTATCAGTCGACATGAGCAAGGAAATCCGTTTGGCCACCGTCAACG
AACACAACAAAGCCACGGATCTGTGGGTGGTCATCGACAACAAGGTCTAC
GATGTGACCAAGTTCCGTCTCGAGCATCCCGGTGGCGAGGAATCCCTGGT
GGATGAGGCCGGTCGCGATGCCACCAAGGCCTTCAATGACGTGGGTCACA
GCTCGGAGGCGAGAGAGATGTTGAAGAAATACTACATTGGTGACCTGGCT
GCTGCGGACATCAAGAAGAAAAGCCCAATTAGGTGAAAGCTTTCTAGACC
AT
BS29531.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:29:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3566-RC | 270 | CG3566-PC | 1..270 | 17..286 | 1350 | 100 | Plus |
| CG3566-RD | 321 | CG3566-PD | 1..266 | 17..282 | 1330 | 100 | Plus |
| CG3566-RB | 354 | CG3566-PB | 1..266 | 17..282 | 1330 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:29:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3566-RC | 1607 | CG3566-RC | 86..355 | 17..286 | 1350 | 100 | Plus |
| CG3566-RD | 770 | CG3566-RD | 86..351 | 17..282 | 1330 | 100 | Plus |
| CG3566-RB | 550 | CG3566-RB | 86..351 | 17..282 | 1330 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:29:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6276532..6276639 | 124..17 | 540 | 100 | Minus |
| X | 23542271 | X | 6276370..6276465 | 213..118 | 465 | 99 | Minus |
| X | 23542271 | X | 6276224..6276298 | 286..212 | 375 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 11:29:20 has no hits.
BS29531.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-25 09:30:16 Download gff for
BS29531.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3566-RC | 40..308 | 17..285 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:42 Download gff for
BS29531.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3566-RC | 86..354 | 17..285 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:44:45 Download gff for
BS29531.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3566-RC | 86..354 | 17..285 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:44:45 Download gff for
BS29531.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6276225..6276296 | 214..285 | 100 | <- | Minus |
| X | 6276370..6276458 | 125..213 | 100 | <- | Minus |
| X | 6276532..6276639 | 17..124 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:42 Download gff for
BS29531.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6170258..6170329 | 214..285 | 100 | <- | Minus |
| arm_X | 6170403..6170491 | 125..213 | 100 | <- | Minus |
| arm_X | 6170565..6170672 | 17..124 | 100 | | Minus |
BS29531.pep Sequence
Translation from 16 to 285
> BS29531.pep
MSKEIRLATVNEHNKATDLWVVIDNKVYDVTKFRLEHPGGEESLVDEAGR
DATKAFNDVGHSSEAREMLKKYYIGDLAAADIKKKSPIR*
BS29531.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:00:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3566-PC | 89 | CG3566-PC | 1..89 | 1..89 | 457 | 100 | Plus |
| CG3566-PD | 106 | CG3566-PD | 1..88 | 1..88 | 452 | 100 | Plus |
| CG3566-PB | 117 | CG3566-PB | 1..88 | 1..88 | 452 | 100 | Plus |
| Cyt-b5-PB | 134 | CG2140-PB | 6..85 | 2..81 | 235 | 52.5 | Plus |
| CG6870-PB | 137 | CG6870-PB | 43..116 | 4..77 | 205 | 52.7 | Plus |
