BS29534.complete Sequence
395 bp assembled on 2012-05-25
GenBank Submission: KX800765
> BS29534.complete
GAAGTTATCAGTCGACATGGCTGCTGCACCCAAGGATATTGAGAAGCCCC
ATGTCGGCGATTCTGCCTCTGTGCACCGCATCCGCATCACCCTGACATCC
AGGAACGTGCGTTCGCTGGAGAATGTGTGCCGCGACCTGATCAACGGTGC
AAAGAACCAGAACTTGCGCGTCAAGGGCCCCGTGCGCATGCCGACCAAGA
CCCTTCGCATCACCACCCGTAAGACTCCTTGTGGTGAGGGTTCCAAGACC
TGGGATCGCTTCCAGATGAGAATCCACAAGCGCATCATCGACTTGCACTC
GCCCTCTGAGATCGTCAAGAAGATTACCTCCATCAACATCGAGCCCGGCG
TAGAGGTTGAGGTCACCATCGCCAACTAAAAGCTTTCTAGACCAT
BS29534.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:29:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpS20-RA | 363 | CG15693-PA | 1..363 | 17..379 | 1815 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:29:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpS20-RA | 564 | CG15693-RA | 91..453 | 17..379 | 1815 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:29:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 20822417..20822574 | 19..176 | 790 | 100 | Plus |
3R | 32079331 | 3R | 20823126..20823245 | 260..379 | 600 | 100 | Plus |
3R | 32079331 | 3R | 20822800..20822891 | 174..265 | 460 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:29:05 has no hits.
BS29534.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-25 09:30:13 Download gff for
BS29534.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpS20-RA | 93..453 | 17..377 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:32 Download gff for
BS29534.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpS20-RA | 91..451 | 17..377 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:44:36 Download gff for
BS29534.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpS20-RA | 91..451 | 17..377 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:44:36 Download gff for
BS29534.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 20822416..20822573 | 17..175 | 99 | -> | Plus |
3R | 20822802..20822891 | 176..265 | 100 | -> | Plus |
3R | 20823132..20823243 | 266..377 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:32 Download gff for
BS29534.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 16648138..16648295 | 17..175 | 99 | -> | Plus |
arm_3R | 16648524..16648613 | 176..265 | 100 | -> | Plus |
arm_3R | 16648854..16648965 | 266..377 | 100 | | Plus |
BS29534.pep Sequence
Translation from 16 to 378
> BS29534.pep
MAAAPKDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNL
RVKGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIV
KKITSINIEPGVEVEVTIAN*
BS29534.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:00:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpS20-PA | 120 | CG15693-PA | 1..120 | 1..120 | 616 | 100 | Plus |