BS29536.complete Sequence
1109 bp assembled on 2012-05-25
GenBank Submission: KX805135
> BS29536.complete
GAAGTTATCAGTCGACATGAAATTTAAACAAATGGACTTTGTGACGACAA
CTGGGGAGGGAAGTTTTCTGCGAAACAAGATTCGTGCATATGCCAAGGAT
CACCGTGTTGAGTGCCGCATAAAGGCGAAAGACTCATTGCGCATTGGACT
TGGACAGGTTAAGCAGGAAGTGGCGGCTCTTGAGATGGGCACCAAGGACG
TCATTGGAATGGCCAGCAGGATCAAGCGTCGCAAGCACGCCACCTCCGAG
GATCTGTGCCGCTTGTCGCTGGGGTTCCTCCAGAGCAATGACAACATCAA
TGCATTCGCAGCTATTCCTGGCGCCATTCAGGTTCTGGTTAAGGAGCTAA
CTGGACCTCACATTCAACGACAGACAGATGCCGTGGAGTGCTTGTGTAAT
CTTTCCTTGGGCGAGGCCCATGTCTCCGAAAAGATTGTCACTTTGGCGGG
CAGCTACATGGTCACCTACCTTGATGGCAAGGCCGAACGCCTCAAGCGCA
GTTGCCTGTGGACACTGGCCAACGTTCTGGGCACATGCGACAAGGCCGGC
AGCGTATTGCTGCAAATGCAAATAGTACCCAAGCTGTGGAGGCTCTACAT
CGAGCCCAATGGCTGCCAAGAAGATGCGGCCATCTGCCTCTCCCTGGTGG
CCACCCGCTGCCCGCAGCATGTGAGTGACGAGGATCGAAGGTACATTGGC
CAGAATCTGCCTGAGAAGCTCCACGGCCAGCCTGCCAGCGAGTACTTCAT
GTACATAGTGCACCAACTGGAAATAGTGACACAGGAGCACAAGTTAGATG
CTCAACAGGCCGAATGCCTGGTGCGTTTCTTTGAAGCCACCTTAGCATCG
CCAGCCGACCGGCTGTGCCTAATCTACGCCGTGCGTGTAATGACCAATCT
GGTAGCCCTAGGTGACACAAGTCTAATATTCGCACTGGCAGACCCGCAGA
ATCTTGTGCAAACCCTAAACCAGCTCTTCGCTCTGCGAGATCCAGATCTC
AACCTGGACGCGATGCGCTTGCTCAAGAACTGTCTGCACTTGAAGGTAGC
AGATTCCAACCTGGTACTGAATAGCTTGCAAATATACGCATAGAAGCTTT
CTAGACCAT
BS29536.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:29:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15443-RB | 1077 | CG15443-PB | 1..1077 | 17..1093 | 5385 | 100 | Plus |
| CG15443-RA | 1077 | CG15443-PA | 1..1077 | 17..1093 | 5385 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:29:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15443-RB | 1731 | CG15443-RB | 487..1564 | 16..1093 | 5390 | 100 | Plus |
| CG15443-RA | 1278 | CG15443-RA | 34..1111 | 16..1093 | 5390 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:29:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4461824..4462564 | 1093..353 | 3705 | 100 | Minus |
| 2L | 23513712 | 2L | 4462623..4462961 | 354..16 | 1695 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 11:29:08 has no hits.
BS29536.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-25 09:30:14 Download gff for
BS29536.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15443-RA | 35..1111 | 17..1093 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:34 Download gff for
BS29536.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15443-RA | 35..1111 | 17..1093 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:44:38 Download gff for
BS29536.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15443-RA | 35..1111 | 17..1093 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:44:38 Download gff for
BS29536.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4461824..4462563 | 354..1093 | 100 | <- | Minus |
| 2L | 4462624..4462960 | 17..353 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:34 Download gff for
BS29536.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4461824..4462563 | 354..1093 | 100 | <- | Minus |
| arm_2L | 4462624..4462960 | 17..353 | 100 | | Minus |
BS29536.pep Sequence
Translation from 16 to 1092
> BS29536.pep
MKFKQMDFVTTTGEGSFLRNKIRAYAKDHRVECRIKAKDSLRIGLGQVKQ
EVAALEMGTKDVIGMASRIKRRKHATSEDLCRLSLGFLQSNDNINAFAAI
PGAIQVLVKELTGPHIQRQTDAVECLCNLSLGEAHVSEKIVTLAGSYMVT
YLDGKAERLKRSCLWTLANVLGTCDKAGSVLLQMQIVPKLWRLYIEPNGC
QEDAAICLSLVATRCPQHVSDEDRRYIGQNLPEKLHGQPASEYFMYIVHQ
LEIVTQEHKLDAQQAECLVRFFEATLASPADRLCLIYAVRVMTNLVALGD
TSLIFALADPQNLVQTLNQLFALRDPDLNLDAMRLLKNCLHLKVADSNLV
LNSLQIYA*
BS29536.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:00:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15443-PB | 358 | CG15443-PB | 1..358 | 1..358 | 1832 | 100 | Plus |
| CG15443-PA | 358 | CG15443-PA | 1..358 | 1..358 | 1832 | 100 | Plus |
