BS29537.complete Sequence
719 bp assembled on 2012-05-25
GenBank Submission: KX803976
> BS29537.complete
GAAGTTATCAGTCGACATGTCCTTTCTTTCGCCCACACTGCGCCTGGAGA
ATCTGTCCACGCAGCCCACGATGACGCAGGATCATGTGCCCGAGGACCAG
CGCTATAACAAACAGAATATTGTGGCTCAATGGTGTGTGCCCATCAATGG
CAAGATGTACCGCATCGAGCTGGAACATGGCACAACCAGTGGGCGGCGCA
TGATTTGGGTCAATGGACGGGAAGTCCTGCGTCGCGACTGGATGTTCAAA
CTGGTTGGCGAAGACACCTTTCACATCGATCAGACGCGCTGCATCATACG
CGTTGATCCTGCGCCGGGCTTCAAATACGAGTACTCCCTCTACATCGACG
GCAAATCGCACGACCAGTACACCGAGGACATGACACGGCAATATCGACTG
TGGCTATATACGGATGATGCGGCCGCCGATGCGCCGCAGGAATATAGAAT
AATGCTCAAACTGGACACGCTGAGTCTCTACGTAAACGATGAGCTGCGCA
CCGAGGAGTCGGTTTTTGTTCACGGCGGCACAGACACCAAGTTCCTGCTG
CAGGACACGGAATTCGTGCTTCAGGCACGCTCAAGTGGCAATAAACATGA
TGGCATCGTTCACACTCTGCTGGCGAATGGGGTGGCAGTTCCGGAGGCGA
AGATTCAGGAGATTATGCAAGAGCCGGTCTCCATTTTGCAGAGCAGCAAC
TGAAAGCTTTCTAGACCAT
BS29537.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:29:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10257-RA | 687 | CG10257-PA | 1..687 | 17..703 | 3435 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:29:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10257-RA | 1377 | CG10257-RA | 554..1241 | 16..703 | 3440 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:29:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 14943770..14944058 | 220..508 | 1445 | 100 | Plus |
2R | 25286936 | 2R | 14944137..14944333 | 507..703 | 985 | 100 | Plus |
2R | 25286936 | 2R | 14942951..14943089 | 16..154 | 695 | 100 | Plus |
2R | 25286936 | 2R | 14943197..14943265 | 153..221 | 345 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:29:32 has no hits.
BS29537.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-25 09:30:19 Download gff for
BS29537.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10257-RA | 342..1027 | 17..702 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:48 Download gff for
BS29537.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10257-RA | 555..1240 | 17..702 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:44:53 Download gff for
BS29537.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10257-RA | 555..1240 | 17..702 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:44:53 Download gff for
BS29537.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 14942952..14943089 | 17..154 | 100 | -> | Plus |
2R | 14943199..14943264 | 155..220 | 100 | -> | Plus |
2R | 14943771..14944058 | 221..508 | 100 | -> | Plus |
2R | 14944139..14944332 | 509..702 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:48 Download gff for
BS29537.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 10830704..10830769 | 155..220 | 100 | -> | Plus |
arm_2R | 10831644..10831837 | 509..702 | 100 | | Plus |
arm_2R | 10830457..10830594 | 17..154 | 100 | -> | Plus |
arm_2R | 10831276..10831563 | 221..508 | 100 | -> | Plus |
BS29537.pep Sequence
Translation from 16 to 702
> BS29537.pep
MSFLSPTLRLENLSTQPTMTQDHVPEDQRYNKQNIVAQWCVPINGKMYRI
ELEHGTTSGRRMIWVNGREVLRRDWMFKLVGEDTFHIDQTRCIIRVDPAP
GFKYEYSLYIDGKSHDQYTEDMTRQYRLWLYTDDAAADAPQEYRIMLKLD
TLSLYVNDELRTEESVFVHGGTDTKFLLQDTEFVLQARSSGNKHDGIVHT
LLANGVAVPEAKIQEIMQEPVSILQSSN*
BS29537.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:00:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10257-PA | 228 | CG10257-PA | 1..228 | 1..228 | 1204 | 100 | Plus |