BS29544.complete Sequence
284 bp assembled on 2012-05-25
GenBank Submission: KX805903
> BS29544.complete
GAAGTTATCAGTCGACATGGAGAACGACGCCGGTGAGAATGTTGATCTGT
ACGTGCCCCGCAAATGCTCGGCGTCCAACAGGATCATCCACGCCAAGGAT
CACGCCTCCGTGCAGCTGAGCATCGTGGATGTGGACCCCGAGACCGGTCG
CCAGACCGACGGTTCCAAGACCTACGCCATCTGCGGCGAGATCCGTCGCA
TGGGCGAGTCCGACGACTGCATCGTGCGTCTGGCCAAGAAGGACGGCATC
ATTACCAAGAACTTCTAAAAGCTTTCTAGACCAT
BS29544.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:29:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpS21-RD | 252 | CG2986-PD | 1..252 | 17..268 | 1260 | 100 | Plus |
| RpS21-RB | 252 | CG2986-PB | 1..252 | 17..268 | 1260 | 100 | Plus |
| RpS21-RA | 252 | CG2986-PA | 1..252 | 17..268 | 1260 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:29:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpS21-RD | 415 | CG2986-RD | 99..350 | 17..268 | 1260 | 100 | Plus |
| RpS21-RB | 619 | CG2986-RB | 75..326 | 17..268 | 1260 | 100 | Plus |
| RpS21-RA | 391 | CG2986-RA | 75..326 | 17..268 | 1260 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:29:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2856376..2856569 | 66..259 | 970 | 100 | Plus |
| 2L | 23513712 | 2L | 2856256..2856305 | 17..66 | 250 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:29:48 has no hits.
BS29544.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-25 09:30:22 Download gff for
BS29544.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| oho23B-RB | 116..365 | 17..266 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:58 Download gff for
BS29544.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpS21-RA | 75..324 | 17..266 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:45:00 Download gff for
BS29544.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpS21-RA | 75..324 | 17..266 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:45:00 Download gff for
BS29544.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2856256..2856305 | 17..66 | 100 | -> | Plus |
| 2L | 2856377..2856576 | 67..266 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:58 Download gff for
BS29544.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2856256..2856305 | 17..66 | 100 | -> | Plus |
| arm_2L | 2856377..2856576 | 67..266 | 98 | | Plus |
BS29544.pep Sequence
Translation from 16 to 267
> BS29544.pep
MENDAGENVDLYVPRKCSASNRIIHAKDHASVQLSIVDVDPETGRQTDGS
KTYAICGEIRRMGESDDCIVRLAKKDGIITKNF*
BS29544.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:00:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpS21-PD | 83 | CG2986-PD | 1..83 | 1..83 | 432 | 100 | Plus |
| RpS21-PB | 83 | CG2986-PB | 1..83 | 1..83 | 432 | 100 | Plus |
| RpS21-PA | 83 | CG2986-PA | 1..83 | 1..83 | 432 | 100 | Plus |
| RpS21-PF | 83 | CG2986-PF | 1..83 | 1..83 | 432 | 100 | Plus |
| RpS21-PE | 81 | CG2986-PE | 1..81 | 1..81 | 420 | 100 | Plus |
