BS29551.complete Sequence
806 bp assembled on 2012-05-25
GenBank Submission: KX805399
> BS29551.complete
GAAGTTATCAGTCGACATGTCAGACAAATATGCGGTGCCCAACAAATTGC
CCGGCAAAACAGTGTCGGTGCTAAAGCATCGCAAGAGGAGAATTCTGCAG
GATGAATCTGTTGTTACGCAGAAAAGAAATGACCGCATCAAAAAGAGAAC
CGCCACCAAGAATCACCACAAATTCCGCCGTGCCGAATCCTTCGTAATGG
GCTACCTGAAAGCAGAGCGCACGTCCAAGCGGATCAAGCAAACCATTCTG
CGCACCAATGTCACCGAACAAAGTGCCAAAGCTGCCGACGATTCCAATCC
CAAACTGCTCTTCGTGATGCGCCATGCGGGCAAGAAGATCTTCGACAAGA
CCACCGCGGATATATTCCGAACCCTGCGCATGGGCTCGCGCCACAACGCC
GTCTTCATGGAGAACACCAAGGAGAACCAGTTGCTGCTGCGCGTTATCGA
ACCCTTTGTAGTCTACGGCAATCCCTCGCTGAGCTCCATTCGCGAGCTGG
TCTTCAAGAAGGGCTTCGCCCGCATCGACGGCAAGAAGACGGCCATCCAG
TCGAACACCATGGTGGAGCAACAGCTGGGCGACAAGGGTGTCATCTGTCT
GGAGGATATAATCCACGAAATTTGCACAGTGGGTCCAAACTTCGCCGCTG
TAAATGAGTTTCTGTGCGCCTTCACGTTGTCCAGTCCCAGCAATGGTTGG
CAAAAGAAGGTATCCGTCTCGTACAAACGCGGTGGCGAGTACGGCGATCG
TGGCACTGCCATCAACGAACTGATTGCCCGCTGCCTGTAGAAGCTTTCTA
GACCAT
BS29551.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:29:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpL7-like-RC | 774 | CG5317-PC | 1..774 | 17..790 | 3870 | 100 | Plus |
RpL7-like-RB | 774 | CG5317-PB | 1..774 | 17..790 | 3870 | 100 | Plus |
RpL7-like-RA | 774 | CG5317-PA | 1..774 | 17..790 | 3870 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:29:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34164-RB | 1771 | CG34164-RB | 75..849 | 17..791 | 3875 | 100 | Plus |
RpL7-like-RC | 958 | CG5317-RC | 97..871 | 17..791 | 3875 | 100 | Plus |
RpL7-like-RB | 1771 | CG5317-RB | 75..849 | 17..791 | 3875 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:29:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 12056499..12057147 | 28..676 | 3245 | 100 | Plus |
2L | 23513712 | 2L | 12057214..12057329 | 676..791 | 580 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:29:55 has no hits.
BS29551.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-25 09:30:24 Download gff for
BS29551.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34164-RB | 97..870 | 17..790 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:02 Download gff for
BS29551.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpL7-like-RA | 75..848 | 17..790 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:45:04 Download gff for
BS29551.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpL7-like-RB | 75..848 | 17..790 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:45:04 Download gff for
BS29551.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 12056499..12057147 | 28..676 | 100 | -> | Plus |
2L | 12057215..12057328 | 677..790 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:02 Download gff for
BS29551.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 12056499..12057147 | 28..676 | 100 | -> | Plus |
arm_2L | 12057215..12057328 | 677..790 | 100 | | Plus |
BS29551.pep Sequence
Translation from 16 to 789
> BS29551.pep
MSDKYAVPNKLPGKTVSVLKHRKRRILQDESVVTQKRNDRIKKRTATKNH
HKFRRAESFVMGYLKAERTSKRIKQTILRTNVTEQSAKAADDSNPKLLFV
MRHAGKKIFDKTTADIFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVY
GNPSLSSIRELVFKKGFARIDGKKTAIQSNTMVEQQLGDKGVICLEDIIH
EICTVGPNFAAVNEFLCAFTLSSPSNGWQKKVSVSYKRGGEYGDRGTAIN
ELIARCL*
BS29551.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:00:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpL7-like-PC | 257 | CG5317-PC | 1..257 | 1..257 | 1313 | 100 | Plus |
RpL7-like-PB | 257 | CG5317-PB | 1..257 | 1..257 | 1313 | 100 | Plus |
RpL7-like-PA | 257 | CG5317-PA | 1..257 | 1..257 | 1313 | 100 | Plus |
RpL7-PB | 252 | CG4897-PB | 7..250 | 4..255 | 344 | 33.3 | Plus |
RpL7-PA | 252 | CG4897-PA | 7..250 | 4..255 | 344 | 33.3 | Plus |