Clone BS29551 Report

Search the DGRC for BS29551

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:295
Well:51
Vector:pDNR-Dual
Associated Gene/TranscriptRpL7-like-RA
Protein status:BS29551.pep: full length peptide match
Sequenced Size:806

Clone Sequence Records

BS29551.complete Sequence

806 bp assembled on 2012-05-25

GenBank Submission: KX805399

> BS29551.complete
GAAGTTATCAGTCGACATGTCAGACAAATATGCGGTGCCCAACAAATTGC
CCGGCAAAACAGTGTCGGTGCTAAAGCATCGCAAGAGGAGAATTCTGCAG
GATGAATCTGTTGTTACGCAGAAAAGAAATGACCGCATCAAAAAGAGAAC
CGCCACCAAGAATCACCACAAATTCCGCCGTGCCGAATCCTTCGTAATGG
GCTACCTGAAAGCAGAGCGCACGTCCAAGCGGATCAAGCAAACCATTCTG
CGCACCAATGTCACCGAACAAAGTGCCAAAGCTGCCGACGATTCCAATCC
CAAACTGCTCTTCGTGATGCGCCATGCGGGCAAGAAGATCTTCGACAAGA
CCACCGCGGATATATTCCGAACCCTGCGCATGGGCTCGCGCCACAACGCC
GTCTTCATGGAGAACACCAAGGAGAACCAGTTGCTGCTGCGCGTTATCGA
ACCCTTTGTAGTCTACGGCAATCCCTCGCTGAGCTCCATTCGCGAGCTGG
TCTTCAAGAAGGGCTTCGCCCGCATCGACGGCAAGAAGACGGCCATCCAG
TCGAACACCATGGTGGAGCAACAGCTGGGCGACAAGGGTGTCATCTGTCT
GGAGGATATAATCCACGAAATTTGCACAGTGGGTCCAAACTTCGCCGCTG
TAAATGAGTTTCTGTGCGCCTTCACGTTGTCCAGTCCCAGCAATGGTTGG
CAAAAGAAGGTATCCGTCTCGTACAAACGCGGTGGCGAGTACGGCGATCG
TGGCACTGCCATCAACGAACTGATTGCCCGCTGCCTGTAGAAGCTTTCTA
GACCAT

BS29551.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:29:56
Subject Length Description Subject Range Query Range Score Percent Strand
RpL7-like-RC 774 CG5317-PC 1..774 17..790 3870 100 Plus
RpL7-like-RB 774 CG5317-PB 1..774 17..790 3870 100 Plus
RpL7-like-RA 774 CG5317-PA 1..774 17..790 3870 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:29:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG34164-RB 1771 CG34164-RB 75..849 17..791 3875 100 Plus
RpL7-like-RC 958 CG5317-RC 97..871 17..791 3875 100 Plus
RpL7-like-RB 1771 CG5317-RB 75..849 17..791 3875 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:29:54
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 12056499..12057147 28..676 3245 100 Plus
2L 23513712 2L 12057214..12057329 676..791 580 100 Plus
Blast to na_te.dros performed on 2014-11-28 11:29:55 has no hits.

BS29551.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-25 09:30:24 Download gff for BS29551.complete
Subject Subject Range Query Range Percent Splice Strand
CG34164-RB 97..870 17..790 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:02 Download gff for BS29551.complete
Subject Subject Range Query Range Percent Splice Strand
RpL7-like-RA 75..848 17..790 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:45:04 Download gff for BS29551.complete
Subject Subject Range Query Range Percent Splice Strand
RpL7-like-RB 75..848 17..790 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:45:04 Download gff for BS29551.complete
Subject Subject Range Query Range Percent Splice Strand
2L 12056499..12057147 28..676 100 -> Plus
2L 12057215..12057328 677..790 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:02 Download gff for BS29551.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 12056499..12057147 28..676 100 -> Plus
arm_2L 12057215..12057328 677..790 100   Plus

BS29551.pep Sequence

Translation from 16 to 789

> BS29551.pep
MSDKYAVPNKLPGKTVSVLKHRKRRILQDESVVTQKRNDRIKKRTATKNH
HKFRRAESFVMGYLKAERTSKRIKQTILRTNVTEQSAKAADDSNPKLLFV
MRHAGKKIFDKTTADIFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVY
GNPSLSSIRELVFKKGFARIDGKKTAIQSNTMVEQQLGDKGVICLEDIIH
EICTVGPNFAAVNEFLCAFTLSSPSNGWQKKVSVSYKRGGEYGDRGTAIN
ELIARCL*

BS29551.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:00:30
Subject Length Description Subject Range Query Range Score Percent Strand
RpL7-like-PC 257 CG5317-PC 1..257 1..257 1313 100 Plus
RpL7-like-PB 257 CG5317-PB 1..257 1..257 1313 100 Plus
RpL7-like-PA 257 CG5317-PA 1..257 1..257 1313 100 Plus
RpL7-PB 252 CG4897-PB 7..250 4..255 344 33.3 Plus
RpL7-PA 252 CG4897-PA 7..250 4..255 344 33.3 Plus