Clone BS29566 Report

Search the DGRC for BS29566

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:295
Well:66
Vector:pDNR-Dual
Associated Gene/TranscriptCG33129-RA
Protein status:BS29566.pep: full length peptide match
Sequenced Size:746

Clone Sequence Records

BS29566.complete Sequence

746 bp assembled on 2012-05-25

GenBank Submission: KX802671

> BS29566.complete
GAAGTTATCAGTCGACATGGCTCAGGTTAAACCGAAAAGTAACAAACAGA
GCGGCAAACCAGTGCCGGCCGCCAAAAAGAGCGTCCAAGAGAAGAGCAGC
GCGCAGCAGAAGAAGAACAAACAGAAGGCCGCGGCAGAAAAAAAGAAATG
CGGATGCTGCAAGTGGACCTTGGGTAGCATCTTCATCATCGCCCTGATTG
CCGGAGCTCTGTACTACGATACCGAGGTGAACGGCAAGGGCGTGTTCGAG
AAATCGGCCACCGGCAAGGTGCTGAAAAATGCCGGAGTCCTGCCGCATGT
CCAGAAGTCCTGGTACACGGTCATGGGGGCCGGAGCGCGGGGCTACAAGT
GGGCGGAAGTGAATGTGCCGCCGTACGCCGAGCCGGTGATCAAGACCACC
TGTGACCTGTGGAAGCTGGCGAGGAATGCGGCCTGCAACGCTTACCAGAA
CGGCAAGGGATACTTTGGCGCCAAATGGCCCGTTGTGGCAAAGTTCATTG
ACCAATACGTGCCCAATTCGTCTGGCAAAATCGAAGCTTTTGCCGCTGGC
GTTAGCGATTTAGCCGCCAGCAGCTATGAAAAGGCTGCAGCGCTCATCAA
GGAAAAGGTGCTTGTTGGCCGTCTCTCGCCCGAGAACATCAATCAGGCGC
TGAACCAGACGCGTAACGCCGCCCTGGAGTACTACAACCAGTTTCACAAA
AAGGTCGACGCATACGCCAAGCTCAAATGAAAGCTTTCTAGACCAT

BS29566.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:30:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG33129-RH 714 CG33129-PH 1..714 17..730 3570 100 Plus
CG33129-RG 714 CG33129-PG 1..714 17..730 3570 100 Plus
CG33129-RC 714 CG33129-PC 1..714 17..730 3570 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:30:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG33129-RH 1661 CG33129-RH 248..961 17..730 3570 100 Plus
CG33129-RG 1782 CG33129-RG 369..1082 17..730 3570 100 Plus
CG33129-RC 1473 CG33129-RC 60..773 17..730 3570 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:30:20
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10965993..10966411 496..78 2095 100 Minus
2L 23513712 2L 10965792..10965910 615..497 595 100 Minus
2L 23513712 2L 10965605..10965719 730..616 575 100 Minus
2L 23513712 2L 10966502..10966564 79..17 315 100 Minus
Blast to na_te.dros performed on 2014-11-28 11:30:20 has no hits.

BS29566.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-25 09:30:28 Download gff for BS29566.complete
Subject Subject Range Query Range Percent Splice Strand
CG33129-RC 109..821 17..729 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:17 Download gff for BS29566.complete
Subject Subject Range Query Range Percent Splice Strand
CG33129-RC 60..772 17..729 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:45:16 Download gff for BS29566.complete
Subject Subject Range Query Range Percent Splice Strand
CG33129-RC 60..772 17..729 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:45:16 Download gff for BS29566.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10966502..10966564 17..79 100   Minus
2L 10965993..10966409 80..496 100 <- Minus
2L 10965606..10965719 616..729 100 <- Minus
2L 10965792..10965910 497..615 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:17 Download gff for BS29566.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10965606..10965719 616..729 100 <- Minus
arm_2L 10965792..10965910 497..615 100 <- Minus
arm_2L 10965993..10966409 80..496 100 <- Minus
arm_2L 10966502..10966564 17..79 100   Minus

BS29566.pep Sequence

Translation from 16 to 729

> BS29566.pep
MAQVKPKSNKQSGKPVPAAKKSVQEKSSAQQKKNKQKAAAEKKKCGCCKW
TLGSIFIIALIAGALYYDTEVNGKGVFEKSATGKVLKNAGVLPHVQKSWY
TVMGAGARGYKWAEVNVPPYAEPVIKTTCDLWKLARNAACNAYQNGKGYF
GAKWPVVAKFIDQYVPNSSGKIEAFAAGVSDLAASSYEKAAALIKEKVLV
GRLSPENINQALNQTRNAALEYYNQFHKKVDAYAKLK*

BS29566.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:00:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG33129-PH 237 CG33129-PH 1..237 1..237 1236 100 Plus
CG33129-PG 237 CG33129-PG 1..237 1..237 1236 100 Plus
CG33129-PC 237 CG33129-PC 1..237 1..237 1236 100 Plus
CG33129-PB 237 CG33129-PB 1..237 1..237 1236 100 Plus
CG33129-PA 237 CG33129-PA 1..237 1..237 1236 100 Plus