BS29566.complete Sequence
746 bp assembled on 2012-05-25
GenBank Submission: KX802671
> BS29566.complete
GAAGTTATCAGTCGACATGGCTCAGGTTAAACCGAAAAGTAACAAACAGA
GCGGCAAACCAGTGCCGGCCGCCAAAAAGAGCGTCCAAGAGAAGAGCAGC
GCGCAGCAGAAGAAGAACAAACAGAAGGCCGCGGCAGAAAAAAAGAAATG
CGGATGCTGCAAGTGGACCTTGGGTAGCATCTTCATCATCGCCCTGATTG
CCGGAGCTCTGTACTACGATACCGAGGTGAACGGCAAGGGCGTGTTCGAG
AAATCGGCCACCGGCAAGGTGCTGAAAAATGCCGGAGTCCTGCCGCATGT
CCAGAAGTCCTGGTACACGGTCATGGGGGCCGGAGCGCGGGGCTACAAGT
GGGCGGAAGTGAATGTGCCGCCGTACGCCGAGCCGGTGATCAAGACCACC
TGTGACCTGTGGAAGCTGGCGAGGAATGCGGCCTGCAACGCTTACCAGAA
CGGCAAGGGATACTTTGGCGCCAAATGGCCCGTTGTGGCAAAGTTCATTG
ACCAATACGTGCCCAATTCGTCTGGCAAAATCGAAGCTTTTGCCGCTGGC
GTTAGCGATTTAGCCGCCAGCAGCTATGAAAAGGCTGCAGCGCTCATCAA
GGAAAAGGTGCTTGTTGGCCGTCTCTCGCCCGAGAACATCAATCAGGCGC
TGAACCAGACGCGTAACGCCGCCCTGGAGTACTACAACCAGTTTCACAAA
AAGGTCGACGCATACGCCAAGCTCAAATGAAAGCTTTCTAGACCAT
BS29566.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:30:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33129-RH | 714 | CG33129-PH | 1..714 | 17..730 | 3570 | 100 | Plus |
CG33129-RG | 714 | CG33129-PG | 1..714 | 17..730 | 3570 | 100 | Plus |
CG33129-RC | 714 | CG33129-PC | 1..714 | 17..730 | 3570 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:30:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33129-RH | 1661 | CG33129-RH | 248..961 | 17..730 | 3570 | 100 | Plus |
CG33129-RG | 1782 | CG33129-RG | 369..1082 | 17..730 | 3570 | 100 | Plus |
CG33129-RC | 1473 | CG33129-RC | 60..773 | 17..730 | 3570 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:30:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10965993..10966411 | 496..78 | 2095 | 100 | Minus |
2L | 23513712 | 2L | 10965792..10965910 | 615..497 | 595 | 100 | Minus |
2L | 23513712 | 2L | 10965605..10965719 | 730..616 | 575 | 100 | Minus |
2L | 23513712 | 2L | 10966502..10966564 | 79..17 | 315 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 11:30:20 has no hits.
BS29566.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-25 09:30:28 Download gff for
BS29566.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33129-RC | 109..821 | 17..729 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:17 Download gff for
BS29566.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33129-RC | 60..772 | 17..729 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:45:16 Download gff for
BS29566.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33129-RC | 60..772 | 17..729 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:45:16 Download gff for
BS29566.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10966502..10966564 | 17..79 | 100 | | Minus |
2L | 10965993..10966409 | 80..496 | 100 | <- | Minus |
2L | 10965606..10965719 | 616..729 | 100 | <- | Minus |
2L | 10965792..10965910 | 497..615 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:17 Download gff for
BS29566.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10965606..10965719 | 616..729 | 100 | <- | Minus |
arm_2L | 10965792..10965910 | 497..615 | 100 | <- | Minus |
arm_2L | 10965993..10966409 | 80..496 | 100 | <- | Minus |
arm_2L | 10966502..10966564 | 17..79 | 100 | | Minus |
BS29566.pep Sequence
Translation from 16 to 729
> BS29566.pep
MAQVKPKSNKQSGKPVPAAKKSVQEKSSAQQKKNKQKAAAEKKKCGCCKW
TLGSIFIIALIAGALYYDTEVNGKGVFEKSATGKVLKNAGVLPHVQKSWY
TVMGAGARGYKWAEVNVPPYAEPVIKTTCDLWKLARNAACNAYQNGKGYF
GAKWPVVAKFIDQYVPNSSGKIEAFAAGVSDLAASSYEKAAALIKEKVLV
GRLSPENINQALNQTRNAALEYYNQFHKKVDAYAKLK*
BS29566.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:00:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33129-PH | 237 | CG33129-PH | 1..237 | 1..237 | 1236 | 100 | Plus |
CG33129-PG | 237 | CG33129-PG | 1..237 | 1..237 | 1236 | 100 | Plus |
CG33129-PC | 237 | CG33129-PC | 1..237 | 1..237 | 1236 | 100 | Plus |
CG33129-PB | 237 | CG33129-PB | 1..237 | 1..237 | 1236 | 100 | Plus |
CG33129-PA | 237 | CG33129-PA | 1..237 | 1..237 | 1236 | 100 | Plus |