BS29568.complete Sequence
2489 bp assembled on 2013-01-23
GenBank Submission: KX802931
> BS29568.complete
GAAGTTATCAGTCGACATGACGATTTTGTACAAAGTGGAGGGCAAGGAGT
TCAGCAAGGACAGCGTTTTTCCGCACAAGAAGGTCCTCTGCTCAGTCTCC
GCACGGAACATCGTTGCGTTTAGCGCCCTCCAGAGCGCCATATTTCCGGC
TTCCCACGGAGGAGATGCCGGCGATGGATCCTTGCCGGGAGCGGGTTTGG
CCGTAGGCGCGAGCAACAGCCATGTGTACGTGTGCGACATCGTGACGCCG
TGGGAATACTATAAGGTGTGCTCCTCCAAATCGCTTATCAGCGTCCTCCA
GTGGAGTCCCAATGGGGAGCAACTGCTGCTTGGATACGTCGGCGGTCGCG
TCGAGATCTGGCAGCCGAGGAACCAGTCAATTAACCTATGGGTGCTGCAG
TATTACGCCACCGTGCCCAGCGAGGACATTATAGAAGCACAGTTCTTTCA
GAATGGCAAAGGAGTGATCTTCAATGCGCTGAAGAAGGATCACACCTACT
ATGCGGAGAAGTTCGAGCGGGTGGAGCAGCAGAGGCCCACTCTCAGCGGA
TTTGGCGGAGTGGCCAGCGAGGGATGCGTGCTACTCACTTCCTCAGGCCT
GCTGGCCGCCTTCAGTCTCCCCGCAATCCAAAAGACATCCGCCGCAGGAG
CTGATGGTCCTGCCCACGAGGTCGTCGAGTTGACACCCGCGCTCCACAGC
ATCGGCATATCGCGCAGCTTCATCGAACACTGCAGCATGACGCCAAGTCC
ATCGGGAGCCCTTAATATCGCTTTCAGCTGTGGCTGGCAGCAACAGTTGG
TGCAATGCTTTAAGGTCTCGCTTTCATTGGAGGGCGAACTGGGTCTGGAG
CAGCACTTGGCCATCAAATCCGAGTCCCAGACCAGCATATTTCTGGGTCC
TCTTGACGGGAGGCGGATCAGTCACCTAAAATGGACGCGAATAGCCAACG
AGGATGTGATTTTTATAGCCTACGCTTGTCCAGATGGTGCTGGCAGCCAA
CTGGAGCAATGGACATTGACACGCCGTCACCAAAGTGTCCACGCCCTTCT
CCAGGGTGGAGGAGGTGCCAACAACAAGCCAAATGAGTTCGTGCAATCGG
AAAGCTGGGAGCAGGTGGGCAAAGTGCAACTAAATGCATCCTTGGCGGAT
ATCAGCGTTACACGACTATCGGTATCAACGCCGGACTCTTGCCAAGTGTA
CGCCATTCTGCAGGACAACAGCGTCCAGGTGCTGGAGCCCAACTCGATGA
AGCAGCTTAATCACACCCAGTTTGATAGGTTATCTGACGCCAGTGGAGCA
GTAAAGTTCGTTAGCGGCGACTTGACACCTAGCAGCCAAATTCTCCTAAT
CTTTGATAGCCATGCACAACTTTACGCCATGCAGGCACCTCTGCCGAAGC
AAGGAGGATCTGGTTTGCTACTTCTGGAATATTGCATCGTTACAGGTTGC
GATGCCAGCGATGTGCTACTCCTTAATCTAGGCAACCTGGAGGCTCTGGT
GGAGAAGCTAACCGACAACTTTACGCGGCAACCTTCCTTTGTGCGGCACT
TTTATTATGCTAATTTTTTGGCCCTCAAGTCCAACATATGCCGCATGCAG
CAGCAGGAGTTTGACAATCTCATTATCCTACACGCAATATCCACCACATT
CAAGAGCCTCCTGCGACCGTCTGATCTGGGTTTCCAGGATAAAGGACCTG
CCGATAACTTGGCCATCAAGCTGGCCGAATCCATTCCGGATGTGGACACC
GTGATGCTGAACCTGGACGCCAAGGACTTTACAGTGGAGCCGGTGATGCT
GCAAAGTCTACAGCAACTGATTCAGTGGGTCACCGACCTGGCACTCAACA
TGCTGCATCGTCTGCCCGAGGAGGTAATGAAGACCAAGCTCTCCGGAAAG
CGGCCTAGCTACGATATCAGCCGAGACATCGTGGCCATCAGCAGTCTGCG
CGAGCTGCTGGTTATGATCCGCATTTGGGGCCTGTTAAACACCCAGTGCC
TGCCCGTCTACACCAAGACGATGGACAACATCGATGTGCTAGTGATCTTG
TTTCGTTTGCTTACTCGCCTGGCCCAGAATCCTGCAGAACCGGACGAAAT
GCTGCTGGACGAGTGCAGCCTGCTTTCCAAGCAGCTCCTAATTCCCCAGC
CCACCAAGTTCAACCCCACCACGCTGCTGAGTGCCCAAGGATTCGCGGCC
GTAAAGTCGGGACAGCTGCAGTTCACCTCCATGGAGGAGCCAACTTGCTT
GCAGGACATGGAGACGGAGGAGGTGGTCTTCGCCAGCTCTGTGAAGGATG
GCGTGAGCAATCTCCAACTGGGCGCCCGACCCAGCCACATTCGGAGATGC
GCCCGCTGCGGATTCGTGTTCGTGAATAACGCCAGCAAAGTGGCCAAGAC
GTCGGCCCTCAAGGCGTGGTTTAGTAAGTGGCTGCACTGCCACTGTGGGG
GCTTTTGGAAGCAGGTTCACTAGAAGCTTTCTAGACCAT
BS29568.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:13:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MED16-RA | 2457 | CG5465-PA | 1..2457 | 17..2473 | 12285 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:13:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MED16-RA | 2755 | CG5465-RA | 74..2530 | 17..2473 | 12285 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:13:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22183211..22185667 | 17..2473 | 12285 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:13:05 has no hits.
BS29568.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-23 09:16:04 Download gff for
BS29568.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MED16-RA | 65..2521 | 17..2473 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:01:09 Download gff for
BS29568.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MED16-RA | 74..2530 | 17..2473 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:23:35 Download gff for
BS29568.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MED16-RA | 74..2530 | 17..2473 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:23:35 Download gff for
BS29568.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22183211..22185667 | 17..2473 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:01:09 Download gff for
BS29568.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18070716..18073172 | 17..2473 | 100 | | Plus |
BS29568.pep Sequence
Translation from 16 to 2472
> BS29568.pep
MTILYKVEGKEFSKDSVFPHKKVLCSVSARNIVAFSALQSAIFPASHGGD
AGDGSLPGAGLAVGASNSHVYVCDIVTPWEYYKVCSSKSLISVLQWSPNG
EQLLLGYVGGRVEIWQPRNQSINLWVLQYYATVPSEDIIEAQFFQNGKGV
IFNALKKDHTYYAEKFERVEQQRPTLSGFGGVASEGCVLLTSSGLLAAFS
LPAIQKTSAAGADGPAHEVVELTPALHSIGISRSFIEHCSMTPSPSGALN
IAFSCGWQQQLVQCFKVSLSLEGELGLEQHLAIKSESQTSIFLGPLDGRR
ISHLKWTRIANEDVIFIAYACPDGAGSQLEQWTLTRRHQSVHALLQGGGG
ANNKPNEFVQSESWEQVGKVQLNASLADISVTRLSVSTPDSCQVYAILQD
NSVQVLEPNSMKQLNHTQFDRLSDASGAVKFVSGDLTPSSQILLIFDSHA
QLYAMQAPLPKQGGSGLLLLEYCIVTGCDASDVLLLNLGNLEALVEKLTD
NFTRQPSFVRHFYYANFLALKSNICRMQQQEFDNLIILHAISTTFKSLLR
PSDLGFQDKGPADNLAIKLAESIPDVDTVMLNLDAKDFTVEPVMLQSLQQ
LIQWVTDLALNMLHRLPEEVMKTKLSGKRPSYDISRDIVAISSLRELLVM
IRIWGLLNTQCLPVYTKTMDNIDVLVILFRLLTRLAQNPAEPDEMLLDEC
SLLSKQLLIPQPTKFNPTTLLSAQGFAAVKSGQLQFTSMEEPTCLQDMET
EEVVFASSVKDGVSNLQLGARPSHIRRCARCGFVFVNNASKVAKTSALKA
WFSKWLHCHCGGFWKQVH*
BS29568.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:06:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MED16-PA | 818 | CG5465-PA | 1..818 | 1..818 | 4224 | 100 | Plus |
