BS29569.complete Sequence
932 bp assembled on 2012-05-25
GenBank Submission: KX802707
> BS29569.complete
GAAGTTATCAGTCGACATGGAAGCAGATCAAGCAGCAAGCAAGGAAGCCG
AATCATGCATCGACCTCTTGGTGATCGTCCTGGACACGAACCCCTCCCAG
CACTTCGTGCGCCAGAACCCACAGAACCTCACGCAAATCCTGGAGGCGGT
GATTGCCTTTGGGAATGCTCACCTGATGCAGAAGGCCCAGAACAAACTGG
CTGTGGTATCCTGCTCCCACCATGCCACAAACTTCCTGTATCCGCTGCCC
AGAAGACAAGTGGAACTGCGCCAAGTGGATGGGCAGTACGAGGCGTTTAA
TCTGGTGGAGAAGACGGTGAAGCAGCAGCTGGGCAGCATCCTGATGAACG
CACCACGGCTCAGCGCTCCTTGTGAGAGTCTCCTGGCCGGCAGCATGTCC
ATGGCGCTGTGCTACATATCAAGGCTCCAGAGGAATCTGGCTCCTGGCGT
CAAGATGCATTCCCGCATCCTGGTCGTCACAGGCAGCAACGAGTGCGCCT
CGCAGTACATGACGTTCATGAACGTCTTCTTCACCGCCCAGAAACTGGGC
ATCACGATCGATACCTGCGCCCTGGACAAGACCCTCAGTTTGCTACAGCA
AGGCTGTGACATTACCTCCGGACAGTTCCTCAAGGTCACCCAGCTGGACG
GCCTGCTGCAGTACCTCCTGTGGGTCTTCCTGCCCGCCCCGCAGATCCGT
CACAAATTGGTCCTGCCGCCACCGCCCAAAGTGGACTACCGCGCCTCCTG
CTTCTGCCATCGTGAGCTGATCGACATTGGCTACGTCTGCTCGGTTTGCC
TCTCGGTCTTCTGCAAATACAGTCCCATATGCACCACTTGCCACACCATT
TTCAAGAATCCCGGTCCTCTGCCCATCAAGGGCAAAAAGAAAAAGAAGAC
CGACAAGCAAATGTAAAAGCTTTCTAGACCAT
BS29569.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:30:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tfb4-RA | 900 | CG5041-PA | 1..900 | 17..916 | 4500 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:30:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tfb4-RA | 999 | CG5041-RA | 31..930 | 17..916 | 4500 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:30:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 1149651..1150070 | 843..424 | 2100 | 100 | Minus |
2L | 23513712 | 2L | 1150131..1150326 | 424..229 | 980 | 100 | Minus |
2L | 23513712 | 2L | 1150379..1150561 | 228..46 | 915 | 100 | Minus |
2L | 23513712 | 2L | 1149514..1149586 | 916..844 | 365 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 11:30:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dbif\P-element_M | 2935 | Dbif\P-element_M P_M 2935bp Derived from X60990. | 382..428 | 885..931 | 109 | 70.2 | Plus |
BS29569.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-25 09:30:30 Download gff for
BS29569.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tfb4-RA | 27..924 | 17..914 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:21 Download gff for
BS29569.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tfb4-RA | 31..928 | 17..914 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:45:19 Download gff for
BS29569.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tfb4-RA | 31..928 | 17..914 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:45:19 Download gff for
BS29569.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 1149516..1149586 | 844..914 | 100 | <- | Minus |
2L | 1149651..1150069 | 425..843 | 100 | <- | Minus |
2L | 1150131..1150326 | 229..424 | 100 | <- | Minus |
2L | 1150379..1150559 | 48..228 | 100 | <- | Minus |
2L | 1150617..1150647 | 17..47 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:21 Download gff for
BS29569.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 1149516..1149586 | 844..914 | 100 | <- | Minus |
arm_2L | 1149651..1150069 | 425..843 | 100 | <- | Minus |
arm_2L | 1150131..1150326 | 229..424 | 100 | <- | Minus |
arm_2L | 1150379..1150559 | 48..228 | 100 | <- | Minus |
arm_2L | 1150617..1150647 | 17..47 | 100 | | Minus |
BS29569.pep Sequence
Translation from 16 to 915
> BS29569.pep
MEADQAASKEAESCIDLLVIVLDTNPSQHFVRQNPQNLTQILEAVIAFGN
AHLMQKAQNKLAVVSCSHHATNFLYPLPRRQVELRQVDGQYEAFNLVEKT
VKQQLGSILMNAPRLSAPCESLLAGSMSMALCYISRLQRNLAPGVKMHSR
ILVVTGSNECASQYMTFMNVFFTAQKLGITIDTCALDKTLSLLQQGCDIT
SGQFLKVTQLDGLLQYLLWVFLPAPQIRHKLVLPPPPKVDYRASCFCHRE
LIDIGYVCSVCLSVFCKYSPICTTCHTIFKNPGPLPIKGKKKKKTDKQM*
BS29569.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:00:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tfb4-PA | 299 | CG5041-PA | 1..299 | 1..299 | 1564 | 100 | Plus |