BS29587.complete Sequence
1286 bp assembled on 2012-05-25
GenBank Submission: KX801156
> BS29587.complete
GAAGTTATCAGTCGACATGAGCATCTCGGCGGTGGATCGCAAAGAGCCGG
GCAGTGTGAGCAGCGGTCTGGGTAGGCGATACGGGCAGCTGCTCCGTGGA
GCCAAGTACACAGATTGCGTGTTCCACGTGTGCGAGGAGCAAGTGAAATG
CCACAAGCTCATCCTGAGCTCCGCCAGTCCCGTTTTCGAGGCAATGTTCT
TTGGTCCCATGCAAAACAACGAGCCCGAGCCGGAAATCGAAATCCACGAC
ATAAGCTCTGCCATCTTCAAGGTGCTGGTGGAGTACATCTACACGGGCGT
CGTTGACTACAATGGCCTGGAGCTGGTGGCCTGCATTGAGCTGTACTACG
CCGCTGAGAAGTATCTGCTGGAGGAGCTGATCGCCGACACGCTGATGGTT
ATCACCCGCAAGCTGCGATTTGCCAATATCTTGCCCGCTCTAGAGCTAAG
TGTTTGCATGGGCCTCGACGGGTTGCTGGAGGTCTGCATGACCTTTTTCA
TGCGATGCTGTGTTAATAATGGACAGTATATGAGCCACCTTAAGGAGCAC
TATGTGCACGTGTCCAAGGAGTGTGTGAAGGCCATAATAGCGGCGTGCAA
GGAACCGCACAAGTTACTCATCTGGTATGTTTATGAGTGGACACGACAGG
AGTGCGAGCAGTTGGGTCTGGGTCCCAGCGATGCCGACTTAGTAGTGCAC
GACTTGGGTGGCAAAACAAGCGACTGGCCTGCGGCTTCGGGTGCTAGTGA
TTTGGAATCACCTGCCCTAACTCCGGTGGTTTTGGTGGAGCGCTGCTATT
ACAAGGCCTGCAGGCCCTTTACAGTGGATGCAGAAACTCCGCTGTTTCGC
TTGCGTCTAAAGTGCTCTAGATTTATCTCCTTGATGGGCTTGGTCCTGAA
CAGCAGGCTGACTCCCAACCTATTGGGTCACGTCCAGCAGCTGGAGTACC
GCGAATCGCTGCGGCTGGACCTTTGCGAGGTGCCCGCTGAAAGCGAGGGT
CCGGCCACGTCGCCCGTATGGAGTCACGTTGTCCAGAGCCAGAATACCAA
GTACAACTGCAACCTGCATCTTGGCTGGCGACGCGAAGAGGCCTGTGTGC
TGAATCCGGAGCTGACCTATGAGCTGCAGATCCGCTGGGACAGCAGTGCT
TACGGCGCCGAGTATCCGTGCAGCCTGCAGTCCTGCCAGGCGGACGGAAT
TCGGTTCACTGACGAGGACAGCTTCAGCGGAAGTCTCGTCAAGGGACTGC
GCTATGCCAACCTGGTGTAGAAGCTTTCTAGACCAT
BS29587.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:30:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11275-RA | 1254 | CG11275-PA | 1..1254 | 17..1270 | 6270 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:30:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11275-RA | 1664 | CG11275-RA | 298..1551 | 17..1270 | 6270 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:30:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 22181276..22182529 | 17..1270 | 6270 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:30:42 has no hits.
BS29587.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-25 09:30:33 Download gff for
BS29587.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11275-RA | 299..1552 | 17..1270 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:29 Download gff for
BS29587.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11275-RA | 298..1551 | 17..1270 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:45:26 Download gff for
BS29587.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11275-RA | 298..1551 | 17..1270 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:45:26 Download gff for
BS29587.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 22181276..22182529 | 17..1270 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:29 Download gff for
BS29587.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 18068781..18070034 | 17..1270 | 100 | | Plus |
BS29587.pep Sequence
Translation from 16 to 1269
> BS29587.pep
MSISAVDRKEPGSVSSGLGRRYGQLLRGAKYTDCVFHVCEEQVKCHKLIL
SSASPVFEAMFFGPMQNNEPEPEIEIHDISSAIFKVLVEYIYTGVVDYNG
LELVACIELYYAAEKYLLEELIADTLMVITRKLRFANILPALELSVCMGL
DGLLEVCMTFFMRCCVNNGQYMSHLKEHYVHVSKECVKAIIAACKEPHKL
LIWYVYEWTRQECEQLGLGPSDADLVVHDLGGKTSDWPAASGASDLESPA
LTPVVLVERCYYKACRPFTVDAETPLFRLRLKCSRFISLMGLVLNSRLTP
NLLGHVQQLEYRESLRLDLCEVPAESEGPATSPVWSHVVQSQNTKYNCNL
HLGWRREEACVLNPELTYELQIRWDSSAYGAEYPCSLQSCQADGIRFTDE
DSFSGSLVKGLRYANLV*
BS29587.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:00:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11275-PA | 417 | CG11275-PA | 1..417 | 1..417 | 2211 | 100 | Plus |
BTBD9-PB | 722 | CG1826-PB | 28..219 | 18..210 | 156 | 26.1 | Plus |
BTBD9-PA | 722 | CG1826-PA | 28..219 | 18..210 | 156 | 26.1 | Plus |