BS29588.complete Sequence
995 bp assembled on 2012-05-25
GenBank Submission: KX803038
> BS29588.complete
GAAGTTATCAGTCGACATGGACGACCAGGCGTGCCCGCGGTGCAAGACCA
CCAAATACCGGAATCCATCGCTCAAGCTGATGGTCAACGTTTGCGGACAC
ACATTATGCGAATCTTGCGTGGACTTGCTGTTCCTCAAAGGATCCGGCGC
CTGTCCAGAGTGCATGGTCCCATTGCGGCGCAACAACTTCCGCGTGCAGC
TTTTTGAGGACCCAATGGTGGAGAAGGAGGTGGATATTCGTAGGCGAATT
CTGCGCGACTACAATAAACGTGAGGAGGACTTTGCCTCCCTGGCGGAGTA
CAATGACTATCTGGAGGAGATCGAGGACATTGTGTACAATCTGTGCAACA
ACATCGACATCATCGAGACAAACAAGCGTATTGAGGCCTACAAGCGTGAT
AACCGTGAGGTCATTCAGCGGAATAAAACCCGCGTGGGACGCGATGAGTA
CGCGTTGGAGGAGATGCTGGAGCTGGAGAAAGTTCAGGAGGAGGCGCGTA
GGAAGGAGCTGGAGGAACTGGAGAACGAGCACAAGAAGAAGAAGGCCCGC
GACAAGCAGGCGCTGATCGAGGAGCTGATGTACAGCGGCAAGGATGCCGC
CCAAATTGTCACCGAGTTCGCCGAAAAAGCGGAAAAGCAGCGCGAGGAGG
AGAAACAGCTTCCACCGCCGAAGCCCGCCAACGAGTTCTCTACGGGCATA
AAGTTCGGACAGACAGCTGATCCCAGTCTGCTGCCCGTTCCCAAATCGGA
GGAGGGTCCACTTTTCGTATACGAGCCACTTGTTCCTTTCAGTGAGGGAC
CTGCCATGCCGCCCACAAATGAGATCGTGTCCAGGGGCTATATTGCCCAC
ATACGAGCTGAAACACCGCAGGAGAACGCCGGCGGATTCACATCCGCTCT
GGCTTGTGAACGGGCGCTTCAGGAGGCGCTGCAGGGACTCTACTATACGG
CTACAACGGGTGTGGTATCTGGCACCTAGAAGCTTTCTAGACCAT
BS29588.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:30:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mat1-RA | 963 | CG7614-PA | 1..963 | 17..979 | 4815 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:30:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mat1-RA | 1213 | CG7614-RA | 110..1072 | 17..979 | 4815 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:30:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10738758..10739720 | 979..17 | 4815 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 11:30:45 has no hits.
BS29588.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-25 09:30:33 Download gff for
BS29588.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mat1-RA | 115..1077 | 17..979 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:31 Download gff for
BS29588.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mat1-RA | 110..1072 | 17..979 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:45:27 Download gff for
BS29588.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mat1-RA | 110..1072 | 17..979 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:45:27 Download gff for
BS29588.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10738758..10739720 | 17..979 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:31 Download gff for
BS29588.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 6626263..6627225 | 17..979 | 100 | | Minus |
BS29588.pep Sequence
Translation from 16 to 978
> BS29588.pep
MDDQACPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFLKGSGACPECM
VPLRRNNFRVQLFEDPMVEKEVDIRRRILRDYNKREEDFASLAEYNDYLE
EIEDIVYNLCNNIDIIETNKRIEAYKRDNREVIQRNKTRVGRDEYALEEM
LELEKVQEEARRKELEELENEHKKKKARDKQALIEELMYSGKDAAQIVTE
FAEKAEKQREEEKQLPPPKPANEFSTGIKFGQTADPSLLPVPKSEEGPLF
VYEPLVPFSEGPAMPPTNEIVSRGYIAHIRAETPQENAGGFTSALACERA
LQEALQGLYYTATTGVVSGT*
BS29588.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:00:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mat1-PA | 320 | CG7614-PA | 1..320 | 1..320 | 1666 | 100 | Plus |
