Clone BS29593 Report

Search the DGRC for BS29593

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:295
Well:93
Vector:pDNR-Dual
Associated Gene/TranscriptAda-RA
Protein status:BS29593.pep: full length peptide match
Sequenced Size:1046

Clone Sequence Records

BS29593.complete Sequence

1046 bp assembled on 2012-05-25

GenBank Submission: KX805398

> BS29593.complete
GAAGTTATCAGTCGACATGGAGCAGTTTCTTAAAGGTCTGCCCAAAGTAG
AGCTCCATGCTCACCTCAACGGTTCCTTGGGCATCAAAAGCCTATGTGAT
CTTGGCGAGCGATTGTATGGAACCTCTTGTAAAGATTTCCTGAAGTTGTG
CGCGCACTTCAGCCGATTTGAAAAGGATATGGATGCATGCTTCGAGAAGT
TTGCATTTGTGCACGAGTTGACCTCCACCCGGGAGGGTCTGCGATTTGCC
ACGGAGTTGGCGATTCGAGATTTCGCTGAGGACAACGTCCAGTATGTGGA
AATGAGGACCACTCCTAAGGCAAACGAGAACTATTCACGCAGGGACTACC
TGCAGATCGTGATCGATGCAATTAAGGCAGCTAGCGAAACGTATCCAGAG
ATAACAGTCAAGCTACTGCCCTCCATCAATCGAGCGGAACCAGTGGACGT
GGCTGAGGAAACAGTTTCCCTGGCTGTGGAGTTGGCACGGGCTCATCCAA
ATCTTATCTTAGGCATCGATCTTAGCGGTAATCCAGGGAAGGGGCGGTTT
TCCGACTTTGCTCCTATTCTTGCACAGGCCCGGGATAAGGGTCTGAAGTT
AGCTATACACTGCGCCGAGATCGAGAATCCATCGGAGGTAAAGGAAATGC
TGCACTTTGGAATGTCCCGCTGTGGACATGGAACTTTTCTTACTCCCGAG
GACATTGGGCAGCTTAAACAACGAAATATTGCCATTGAATGCTGCCTCAC
TAGTAATGTTAAGTCGGGAACAGTGCCCAGCTTGGAGGAGCACCACTTGA
AAAGAATCATGGAGGCAGATGCACCCAAGGTTATCTGCACGGACGACAGT
GGCGTTTTTGATACCACTTTGACAAAGGAGTTTCTGATTGCTGCGGAAAC
TTTCGGTCTAACCCGTGAACAATGCATCGATTTGACCTTGGAGGCAGTGC
ATCATTCATTCGCCAGCGAACAGGAGCAAATACAGATGGCGGATAGGGTG
GGGAACTACGCAGACATATTGGTCAAATAAAAGCTTTCTAGACCAT

BS29593.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:30:54
Subject Length Description Subject Range Query Range Score Percent Strand
Ada-RA 1014 CG11994-PA 1..1014 17..1030 5070 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:30:55
Subject Length Description Subject Range Query Range Score Percent Strand
Ada-RA 1121 CG11994-RA 57..1072 17..1032 5080 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:30:52
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 9065239..9066254 17..1032 5080 100 Plus
Blast to na_te.dros performed on 2014-11-28 11:30:53 has no hits.

BS29593.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-25 09:30:35 Download gff for BS29593.complete
Subject Subject Range Query Range Percent Splice Strand
Ada-RA 61..1072 17..1028 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:35 Download gff for BS29593.complete
Subject Subject Range Query Range Percent Splice Strand
Ada-RA 57..1068 17..1028 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:45:31 Download gff for BS29593.complete
Subject Subject Range Query Range Percent Splice Strand
Ada-RA 57..1068 17..1028 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:45:31 Download gff for BS29593.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9065239..9066250 17..1028 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:35 Download gff for BS29593.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 4890961..4891972 17..1028 100   Plus

BS29593.pep Sequence

Translation from 16 to 1029

> BS29593.pep
MEQFLKGLPKVELHAHLNGSLGIKSLCDLGERLYGTSCKDFLKLCAHFSR
FEKDMDACFEKFAFVHELTSTREGLRFATELAIRDFAEDNVQYVEMRTTP
KANENYSRRDYLQIVIDAIKAASETYPEITVKLLPSINRAEPVDVAEETV
SLAVELARAHPNLILGIDLSGNPGKGRFSDFAPILAQARDKGLKLAIHCA
EIENPSEVKEMLHFGMSRCGHGTFLTPEDIGQLKQRNIAIECCLTSNVKS
GTVPSLEEHHLKRIMEADAPKVICTDDSGVFDTTLTKEFLIAAETFGLTR
EQCIDLTLEAVHHSFASEQEQIQMADRVGNYADILVK*

BS29593.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:00:54
Subject Length Description Subject Range Query Range Score Percent Strand
Ada-PA 337 CG11994-PA 1..337 1..337 1740 100 Plus
Adgf-B-PA 520 CG5998-PA 240..448 82..277 156 29 Plus