BS29593.complete Sequence
1046 bp assembled on 2012-05-25
GenBank Submission: KX805398
> BS29593.complete
GAAGTTATCAGTCGACATGGAGCAGTTTCTTAAAGGTCTGCCCAAAGTAG
AGCTCCATGCTCACCTCAACGGTTCCTTGGGCATCAAAAGCCTATGTGAT
CTTGGCGAGCGATTGTATGGAACCTCTTGTAAAGATTTCCTGAAGTTGTG
CGCGCACTTCAGCCGATTTGAAAAGGATATGGATGCATGCTTCGAGAAGT
TTGCATTTGTGCACGAGTTGACCTCCACCCGGGAGGGTCTGCGATTTGCC
ACGGAGTTGGCGATTCGAGATTTCGCTGAGGACAACGTCCAGTATGTGGA
AATGAGGACCACTCCTAAGGCAAACGAGAACTATTCACGCAGGGACTACC
TGCAGATCGTGATCGATGCAATTAAGGCAGCTAGCGAAACGTATCCAGAG
ATAACAGTCAAGCTACTGCCCTCCATCAATCGAGCGGAACCAGTGGACGT
GGCTGAGGAAACAGTTTCCCTGGCTGTGGAGTTGGCACGGGCTCATCCAA
ATCTTATCTTAGGCATCGATCTTAGCGGTAATCCAGGGAAGGGGCGGTTT
TCCGACTTTGCTCCTATTCTTGCACAGGCCCGGGATAAGGGTCTGAAGTT
AGCTATACACTGCGCCGAGATCGAGAATCCATCGGAGGTAAAGGAAATGC
TGCACTTTGGAATGTCCCGCTGTGGACATGGAACTTTTCTTACTCCCGAG
GACATTGGGCAGCTTAAACAACGAAATATTGCCATTGAATGCTGCCTCAC
TAGTAATGTTAAGTCGGGAACAGTGCCCAGCTTGGAGGAGCACCACTTGA
AAAGAATCATGGAGGCAGATGCACCCAAGGTTATCTGCACGGACGACAGT
GGCGTTTTTGATACCACTTTGACAAAGGAGTTTCTGATTGCTGCGGAAAC
TTTCGGTCTAACCCGTGAACAATGCATCGATTTGACCTTGGAGGCAGTGC
ATCATTCATTCGCCAGCGAACAGGAGCAAATACAGATGGCGGATAGGGTG
GGGAACTACGCAGACATATTGGTCAAATAAAAGCTTTCTAGACCAT
BS29593.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:30:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ada-RA | 1014 | CG11994-PA | 1..1014 | 17..1030 | 5070 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:30:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ada-RA | 1121 | CG11994-RA | 57..1072 | 17..1032 | 5080 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:30:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 9065239..9066254 | 17..1032 | 5080 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:30:53 has no hits.
BS29593.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-25 09:30:35 Download gff for
BS29593.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ada-RA | 61..1072 | 17..1028 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:35 Download gff for
BS29593.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ada-RA | 57..1068 | 17..1028 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:45:31 Download gff for
BS29593.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ada-RA | 57..1068 | 17..1028 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:45:31 Download gff for
BS29593.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 9065239..9066250 | 17..1028 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:35 Download gff for
BS29593.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 4890961..4891972 | 17..1028 | 100 | | Plus |
BS29593.pep Sequence
Translation from 16 to 1029
> BS29593.pep
MEQFLKGLPKVELHAHLNGSLGIKSLCDLGERLYGTSCKDFLKLCAHFSR
FEKDMDACFEKFAFVHELTSTREGLRFATELAIRDFAEDNVQYVEMRTTP
KANENYSRRDYLQIVIDAIKAASETYPEITVKLLPSINRAEPVDVAEETV
SLAVELARAHPNLILGIDLSGNPGKGRFSDFAPILAQARDKGLKLAIHCA
EIENPSEVKEMLHFGMSRCGHGTFLTPEDIGQLKQRNIAIECCLTSNVKS
GTVPSLEEHHLKRIMEADAPKVICTDDSGVFDTTLTKEFLIAAETFGLTR
EQCIDLTLEAVHHSFASEQEQIQMADRVGNYADILVK*
BS29593.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:00:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ada-PA | 337 | CG11994-PA | 1..337 | 1..337 | 1740 | 100 | Plus |
Adgf-B-PA | 520 | CG5998-PA | 240..448 | 82..277 | 156 | 29 | Plus |