BS29613.complete Sequence
947 bp assembled on 2012-05-25
GenBank Submission: KX805282
> BS29613.complete
GAAGTTATCAGTCGACATGGCCCAAACGGAAGTGCTGGTGTTCGGCTCGG
CCATCATTGACTTTATAAGCTACACGACCCGTCTACCGAAAGCCGGAGAA
ACGCTCCATGGGCATCGCTTTCAGATTGGCTACGGCGGCAAGGGCGCCAA
TCAGTGTGTGGCTGCCGCGCGCCAGGGATCCCGAACAGCTCTGGTGGCCA
AACTGGGGGCAGACACATTCGGCAGCGACTACCTGAGACATCTGCGCGAG
GAGCGCGTCAATGTAAACCACGTCGAGCAGCTGGCGGAGGAAACGACGGG
CGTGGCCCAGATAGCCGTGTCAGATGGCGGCGAGAACAACATCATCATTG
TGGTGGGCGCCAACAATCGACTGAGCTCGTGTGACGTTTCCTCGGCGAAG
GCGCTCTTCCAGGAAGCCAAAGTTCTGGTGTGCCAGCTGGAGACGCCCGT
TGAGGCCACCCTGACCGCTCTGAGAGCCTTCCGGGGCGTGTCCATCGTCA
ATGCGGCTCCGGCCATGGCCGACACACCCCCCGAACTTCTTCAGTTGGCC
AGCATCTTCTGTGTGAACGAAAGCGAGGCGGCACTGATGACTCAGATGCC
CGACATTGGCAACATAGAGCACGCCGAAGATGCGGTTGGAAAGCTGATAG
CGGCAGGTGCCAACACGGTGATCATAACTCTGGGCAAACTAGGAGCCGTT
TTCGGTTCCGCCGACTCCAAGGGCGTGTGCCAGCATGTGGCTGCGCCGAG
TGTGCCGCCCGAAAAAGTGGTGGACACGACGGGGGCTGGAGACGCCTTCA
TTGGGGCCTTGGCCCACAACTTGGCCCGTCATCCAACGAGGAAACTGGAG
GAGCACATAGCCGCCGCCTGTGCCGTGGCCTCGCAATCCGTTCAGCTACC
CGGGACGCAGTCGAGCTTCCCACACGCTTAGAAGCTTTCTAGACCAT
BS29613.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:30:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13369-RA | 915 | CG13369-PA | 1..915 | 17..931 | 4575 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:30:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13369-RA | 1175 | CG13369-RA | 215..1130 | 17..932 | 4580 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:30:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 623794..624345 | 68..619 | 2760 | 100 | Plus |
X | 23542271 | X | 624407..624720 | 619..932 | 1570 | 100 | Plus |
X | 23542271 | X | 623682..623734 | 17..69 | 265 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:30:57 has no hits.
BS29613.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-25 09:30:35 Download gff for
BS29613.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13369-RA | 216..1130 | 17..931 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:37 Download gff for
BS29613.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13369-RA | 215..1129 | 17..931 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:45:32 Download gff for
BS29613.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13369-RA | 215..1129 | 17..931 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:45:32 Download gff for
BS29613.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 623682..623734 | 17..69 | 100 | -> | Plus |
X | 623796..624344 | 70..618 | 100 | -> | Plus |
X | 624407..624719 | 619..931 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:37 Download gff for
BS29613.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 517715..517767 | 17..69 | 100 | -> | Plus |
arm_X | 517829..518377 | 70..618 | 100 | -> | Plus |
arm_X | 518440..518752 | 619..931 | 100 | | Plus |
BS29613.pep Sequence
Translation from 16 to 930
> BS29613.pep
MAQTEVLVFGSAIIDFISYTTRLPKAGETLHGHRFQIGYGGKGANQCVAA
ARQGSRTALVAKLGADTFGSDYLRHLREERVNVNHVEQLAEETTGVAQIA
VSDGGENNIIIVVGANNRLSSCDVSSAKALFQEAKVLVCQLETPVEATLT
ALRAFRGVSIVNAAPAMADTPPELLQLASIFCVNESEAALMTQMPDIGNI
EHAEDAVGKLIAAGANTVIITLGKLGAVFGSADSKGVCQHVAAPSVPPEK
VVDTTGAGDAFIGALAHNLARHPTRKLEEHIAAACAVASQSVQLPGTQSS
FPHA*
BS29613.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:00:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13369-PA | 304 | CG13369-PA | 1..304 | 1..304 | 1527 | 100 | Plus |
CG17010-PA | 429 | CG17010-PA | 6..301 | 5..302 | 685 | 48 | Plus |